LOCUS       XM_017600343            2475 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC108348302), transcript variant X1, mRNA.
ACCESSION   XM_017600343
VERSION     XM_017600343.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017600343.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017600343.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2475
                     /gene="LOC108348302"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     ESTs, 6 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 216
                     samples with support for all annotated introns"
                     /db_xref="GeneID:108348302"
                     /db_xref="RGD:11429468"
     CDS             269..1831
                     /gene="LOC108348302"
                     /codon_start=1
                     /product="zinc finger protein 709-like"
                     /protein_id="XP_017455832.1"
                     /db_xref="GeneID:108348302"
                     /db_xref="RGD:11429468"
                     /translation="MDLVSFEDVAVHFTQEEWALLDPSQKNLYRDVMLETCRSLAAIG
                     YKWEEQNVEDDCKNVGRIQRHVISDSEYLPEEQEGYGSKPYDSSSLPSIQGYTGAHTV
                     NGPCECEVCLKSFGFPSTFGMYHQPHSGQNFCDYKECGKASVYHSSLYTHGGTHSIRK
                     CYSCNQCGKVLSSSSSLQRHERIHTGERPYKCQQCGKALSSSTSLQRHERIHTGERPY
                     KCQQCGKAFRCHSALQLHERIHTGEKPYECQQCGKAFTCHSYLRLHERTHTGEKPYEC
                     KQCGKAFRCQTSYHRHKIIHGGETFYECKQCSRLFIYPSLLQMHERTHTSERPYKCKE
                     CGKSFLYPSLLQMHERTHTGEKPYECKQCGTAFRHHSSLRLHERTHTGEKPYECQQCG
                     KAFTRHTSLRLHEITHTGEKPYKCKECGKAFRHHSSLRLHGRNHSGEKPYECKQCDKA
                     FIRYSYLRLHERTHTGEKPYECKQCGKAFSRHSSFQRHKSIHTVENPYECQQYLIPLP
                     LFPPSTSDNSFW"
ORIGIN      
        1 gcctagccta ggagggcggg gctatgcctg ttatttgaat tccacgcctc ggcctttgga
       61 agcaggtgcc actcaggctt tgctagccaa tcagggccta ggaccgtgcc gtctaatctg
      121 gagcaccgga gaacggcaag aggcggggtc ttctcggccg ccatactgta ggctccgctc
      181 cgcggcacag ggaggtgcag tgtgctgtgc tgtgagcccc gctgccggga cctgtgagga
      241 gagcgcgggc gagtccggaa gccgcgccat ggatttggtg agctttgagg acgtggctgt
      301 gcacttcacc caggaagagt gggctctgct ggatccttcc cagaagaatc tgtacaggga
      361 tgtgatgctg gagacctgca ggagcctcgc tgctataggg tataaatggg aagaacagaa
      421 tgttgaagat gactgcaaaa atgttggaag aattcaaagg catgtcatat ctgactctga
      481 atatttacca gaggagcagg agggatacgg aagcaaaccg tacgattcta gttctctccc
      541 aagtatccaa ggatacacgg gtgctcacac tgtgaatgga ccttgtgaat gtgaggtatg
      601 tttaaaatcc tttggttttc caagtacatt tggaatgtat caccaacccc acagtggaca
      661 aaacttctgt gactataagg aatgtggaaa ggcttctgtt tatcacagtt cactttacac
      721 acatggagga actcacagta taagaaaatg ttactcatgt aaccagtgtg gcaaagttct
      781 gagttcttcc agttcccttc aaaggcatga gagaatccac acgggagaga gaccctataa
      841 atgtcagcag tgcgggaagg ctctgagttc ttccacttcc cttcagaggc atgagagaat
      901 ccacacagga gagagaccct ataaatgtca gcagtgcggg aaagccttta gatgtcacag
      961 tgcccttcag ttacacgaaa gaattcacac tggtgagaaa ccctacgaat gtcagcagtg
     1021 tgggaaagcg ttcacatgtc acagttacct tcgattacac gagaggactc atactggaga
     1081 gaaaccctat gaatgtaagc agtgcgggaa ggccttcagg tgtcagactt cctatcacag
     1141 acataaaatc attcacggcg gagaaacgtt ctatgaatgt aagcagtgca gcaggctctt
     1201 catctatccc tctctgcttc agatgcatga aagaactcac accagcgaaa gaccatataa
     1261 atgtaaggag tgcgggaagt cattccttta tccctcttta cttcaaatgc acgaacggac
     1321 tcacaccggg gagaaaccct atgagtgcaa gcaatgtggt acagccttta gacatcactc
     1381 ttcccttcga ctgcatgaaa gaactcacac aggagagaag ccctacgagt gtcagcagtg
     1441 tgggaaagcc ttcactcgcc acacttccct tcggttgcat gagataaccc acactggaga
     1501 gaaaccttac aaatgcaaag aatgtgggaa ggcctttaga catcactctt cccttcgcct
     1561 gcacggaaga aatcatagtg gagagaagcc ctacgagtgt aaacaatgtg ataaagcctt
     1621 tatacggtac agttacctcc gattacacga gcgaacacac acaggagaaa aaccttacga
     1681 atgcaaacag tgtgggaaag ccttcagccg tcacagttcc tttcagagac ataaatctat
     1741 ccacaccgtg gaaaacccct atgagtgtca gcagtatcta atccctttgc ccctatttcc
     1801 tccaagtaca tcggacaact cgttctggtg agaaacacta cggatgtgag cagtgctgaa
     1861 gtgttgtcct tacccacgta aaacacatgc aagaacaaag atgtcacaga ataagcctca
     1921 tccacagaaa tgattccatt tagacttcaa aggcacgaag gacttcatgc tgggcacagt
     1981 ttctacaaat gtaagcaatg cgtggtaagt cctttattgg tcactttcct ttcacagaaa
     2041 caagtaattc atgccttatg aatggaaaca atatggttag tcttttatcc ctgtttgctt
     2101 caaacatgaa aaaaacttaa ggtgcagaat gctgtgaatg tcaacagctg aagccttcca
     2161 gagttgcagg tcccttcagt gtcgtgaacg gcgtcttcct ggaggaaaaa ccctgtgatg
     2221 tttaggtgcc attgcctcca tagatcccat gacagtcttc ttttggaaac aatgcctgtg
     2281 agtggaaaca aagctgtgac gccctcacgc tcagttcctt tcaaagatgt acaaatatta
     2341 gtggtgggac aaagccatat acataacaaa tctggtaagt ttcggttgtc agtaggtgtc
     2401 agctttgtca gtagtgcagc tgcctgtaag ttgcctgtgc tcagtaaccc aattaaagtc
     2461 agtggtgccc caggc
//
