LOCUS       XM_039100737            6997 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal type-1 receptor 3-like
            (LOC108348146), mRNA.
ACCESSION   XM_039100737
VERSION     XM_039100737.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100737.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6997
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6997
                     /gene="LOC108348146"
                     /note="vomeronasal type-1 receptor 3-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108348146"
                     /db_xref="RGD:11394442"
     CDS             1929..2846
                     /gene="LOC108348146"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 4-like"
                     /protein_id="XP_038956665.1"
                     /db_xref="GeneID:108348146"
                     /db_xref="RGD:11394442"
                     /translation="MKMTSANLATGIFLFSQTAMGMIGNSSILFYYIILIFTGKHLMP
                     KDQIIEHLTFANCLSIISKGIPQSLSDLGFKDFLDDIGCKLIMFIYRIVRGMSLYAMC
                     LLSCFQAITISPRNSRWMMLKHRATKYIGPSCLVSWLLHLLLNITAPIKVTGPISRKN
                     VTNMMSYGYCSWFTSNSVASTLYMFILCFCDGLCLSLMACSSVSMVNILYRHKRQVKH
                     IHSAQHFLKVLPEDRATLIILILVCTFVISYFISSIRVILTTFSVGSVLWGVSLFIFL
                     EICFPIFCPFVLICNIKCNFQMFLPCCCK"
ORIGIN      
        1 tctttcagct ctaggtgtgg acatggatca aagggtcctg cccctgattg ctcctaggac
       61 cttgcaccta tggggcacag ttggcactag gcgattccct cttgggtcct gactgaggga
      121 agtgggtagc ctcctctgac ttctcagaag tgtccacact tttgagagtc cagctctctc
      181 ccccatagga tttgggtaca aggagctgtt tggccggtgc agttcggtcc tgtgcacaga
      241 ccagaaccat ggctattggc atcagattgt tcctatattc ctgtgtccag aggaaccttg
      301 gaccagggat gtggaccgaa gtgtgcagaa gtggcaatct gtcctgcagt ttcacgatgt
      361 ctgcactcct gggtgttcaa ctctctttcc caaggtattt gggtgcaggg aactatggga
      421 tgatatcagt tcacttccgg ccagagccag aaacagaaag ttccctgacc ctgaggactt
      481 atgtctctgt gtctcctgaa tctaccaggc aggtcacttg gtagcagaaa agtgggtctt
      541 acctctgctc tcaggtgtgt tagcactcct gcagactgtc ttccagctct aggcactggc
      601 aggaatcaga gggtcctgcc cctgattgtt cctaggtgat tgcacccagg gggcacattt
      661 ggcactaggt tattccctct tggatctgga ctgtgggcag agggtagtct cctctgactt
      721 ctcatcagtg tccacacttc tgaggttcca gctctctccc acatgggatt tgggttcagg
      781 gagttgtttg gacggttcag atcagtcctg tgtgcagacc agaactgtgg gaacaagcag
      841 ctgtctgttc ctatattcct gtttccagag gcactgtgca gtttcccctc tgaacgggga
      901 tgtaggcagt ggtgtacaga agtggcattc tgtcctgtgt tctcatgatg tctgcactcc
      961 tgggtgttca gctctcttcc tcaccggctt gaattctatt taatgtgaat tgtaagaaat
     1021 aattgaatat tttaaaattc gttctttgaa aattgacccc aaatcattct ttaattaaaa
     1081 gggagaaata tattaatctt tttgtttgta cttttttttt ttttactttt tgagaatgtg
     1141 attctctgtg tatagctatg actgtcctgg aactggaacc agattaggct tagaatcata
     1201 gctctgacaa agtacagagt tggaggctta cagccaacca tggggaccac aatggaagat
     1261 ttagagaaag aattgaagga gctgaagggt tttgcaaccc cataggaaaa acaacaatat
     1321 caactgacta gaccccagag ttcccaagaa tgaaaccacc taccaaagag tatacatgga
     1381 ggaccccttt gctccagctg catatgtagg agaggatgac attatctggc atcaagagaa
     1441 ggagaaacac tagttcctgt gagggctcaa tttccccagt gttaggaaat gccagggaga
     1501 tgaggtggga gaggatggtt agaaggggca gcaccctcat agaagcaggg gaatggggga
     1561 ttggaggcag gttctggagg ggaaaccatg aaaggggata acatttgaaa tgtaaataca
     1621 taatatatcc aatagaaaaa gaatcatagt tctgtctgct tctgagtctt tagtcctatg
     1681 attaaggcat gtaccatcac atcctggaaa aactttataa tttagaaaat gtatctaata
     1741 gtttttattt taaaaataca gatatatcta cttctaaaag aaaaaaatat tcttcttcag
     1801 tgggagtgct atatagataa aattaaatta tgactacttt attctagtta actttatgaa
     1861 ataatgtata cttaatatat ttccaggatt tcttgaccat aatatattta tttccctttt
     1921 taataggcat gaaaatgact tctgcaaact tggcaacagg aatatttctc ttctcccaga
     1981 ctgcaatggg aatgattggc aattcctcaa tactatttta ttatatcatt ttgatattca
     2041 ctggcaagca tttaatgccg aaagaccaga ttatagagca cctgacattt gccaactgtt
     2101 tgtctatcat ctcaaaaggc attccacagt ctctgtcaga tttgggattt aaggatttcc
     2161 tagatgatat tggatgtaaa ctgataatgt ttatttaccg aatagtgagg gggatgtctc
     2221 tgtatgcaat gtgcctattg agttgcttcc aagcaatcac aatcagcccc aggaactcca
     2281 ggtggatgat gcttaaacac agagccacaa agtacattgg tccctcctgc ttagtcagtt
     2341 ggcttctgca cctgcttcta aacatcacag ctccaataaa agtgacaggc cccatttcta
     2401 gaaaaaatgt gacaaacatg atgagttatg gttactgctc atggttcact tccaacagtg
     2461 ttgccagtac attgtatatg ttcatattgt gcttctgtga tggcctgtgt ctgagtctca
     2521 tggcatgctc aagtgtttcc atggtgaata tcctgtacag acataagaga caagtcaaac
     2581 atatccacag tgctcaacat tttttgaaag tcttgcctga ggacagagcc accctaatta
     2641 ttcttatcct agtatgcaca tttgtcattt cttacttcat ctcttctatt cgtgtaatcc
     2701 ttaccacatt ctctgtggga tcagtgctat ggggagtgag tttatttata tttctagaaa
     2761 tatgctttcc catattttgc ccctttgttc tcatctgcaa tatcaagtgt aatttccaaa
     2821 tgtttttacc ctgctgttgt aagtgatagc tctctccaaa taccacttaa tatatgctca
     2881 tttttcttat acactgccat attatattct tttaacaaat gtacatcagt aagactacag
     2941 tttgaaattt tcaatcatcc tttaactgac tcctcttgac atgtgttttg attactattt
     3001 gttttatcat agtttatttt ttacagaact tattatccaa taatgagcaa atttcaaata
     3061 tattgaatca ccacaatata caagctattt tgtaatatta cacataatat aggagtacct
     3121 aaaaaataca tctgggacca gacctcatct gtagcctata gaatcaagta atgatttctt
     3181 gacacatctc tctctctctc tctctctctc tctctctctc tctctctctt tccatatata
     3241 tgtgtatata tgtatatata cacgtgtata tacatatatg caaatataca cacatttgtt
     3301 atacagacac acatagacat aaacacgctt gcacaaaaca gttagttata cacatattca
     3361 tatatgtgtg tatactttta tttttatggg tttgtgaatt tattctgcat gtatgtctgg
     3421 gcaccacatg tacaaagtac ttccattgat cagaagatgc attaaaaaat gtaaaacggc
     3481 agttacacat tcttgtgtac caacattgag tgctgaagtt aaaacctgca tcttttggaa
     3541 tagcaatcag tgctcttaac caccaatccg ttctttacac aatgagcacg tttttatcat
     3601 ttaaatattt taatgttttt tacaagtgtg tgcctcagca caactatatg cgtcacaaac
     3661 aatgtctgtt gcctatagct gcaagaagag cgtgttggat ctcctgtaac tagagttaca
     3721 tgcagctgtg agcttcctga tgtgcttgct gggaattgaa ctcagtttcc tttgaaatat
     3781 cattatacgt ttccacactt aaccagctat ctagctccaa gtttttgctt attacttctc
     3841 atgtgtagga actacaatcc tttaaatatc atatggtctg aaaatgttgc aaaaaaatga
     3901 atgtgaccat agtcgcctta aaaatagtca tcagtctcag aaaaaaaatt gcattttcct
     3961 tcatgtaaaa tcaaggaaca aaaagatatc agaggacaat atgaactact gagaagagga
     4021 aaagaaccat agagtaaaaa tgaggtatat aaatgagata atgaaggata aatatgattc
     4081 agttacaaaa tacatagaca tgaaagcatc acaatgtaaa ccattacttc gtacaattaa
     4141 taaatacttt aaaatataaa gtaattgaaa cttgttacca cctcctgtta catatttggt
     4201 tcattttact aatgtaacta ttgccatacc tccatatcct acatgccatg tactattaca
     4261 ttgactttct aaaagtttca tcaaaatatt ttaactgtgt gtaaattatt gttctttgaa
     4321 catatttgca tcttcaggaa aatgtacctg tgggttcttc ctttcttctg acaaacacat
     4381 ttctaaggta cttaatttat aataactttt gctaaaagta aattgttctt tttctgcaca
     4441 gaagaaatat acccttcaat cctctagagt ctagatatgg caataaccga agtacttgcc
     4501 atggacattc taaaaggtcc atcttcccca aggggactgg aacatataaa acatggacct
     4561 tggtggagag accttcagaa tctggtttta gtgccacttg tagtgagaat attggtttct
     4621 ttaaaaacag agaaatatta taaggatatg ttgttattta attataggtg tatgacacgg
     4681 gactgcttca gattgtccac agcagctgac tatggctcat tgtttgctct agcaagaggc
     4741 aacagatagt ttctggcatt gtgtagtgtt tggatttccg gtgaattttc agaaagtatt
     4801 taaatcctag gtctctgaga gacatggagg gttgctggtt gattgttggc ctttggttga
     4861 ggtttgttaa gtaatcatgt acaaagaaat tagatagcct gacactataa ctaacaatca
     4921 aacttactcc aagaaactag atgcctctaa tcagcatgat gtagtctaat aataatgtta
     4981 tcccatttct ctctacacat tttctctcct atctagtgta ctctacttga tttgagtctt
     5041 tttagattgt ctgtatacac ttttaagttt atttcattca gttatctcat acttagtttt
     5101 atttccattt accttttcac aaaacaggac acttttcctt atttttgttt gtataacttg
     5161 tagagtcctc ctccagtaga aagacaggtc atcaactgga ggtttggcat tttcatccca
     5221 cagtaaaaaa ctctgaccag aattgttcct gtagtaaaga actacaggga caaaaatgga
     5281 gaagagactt tgggaaagga ggtctattga ccagcccaac ttgggattca gctcaagggg
     5341 aggctctaag acctgacact attactgatg ctgtggtcta tttatagata tgagtctagt
     5401 gtatctgtcc tcctagaggc ccaacaagca gctgattgag acagatgcat ttatttacac
     5461 ccaaacaatg gactggactc ggagacccct atagttgaat tagggaaagg ctgaaagatg
     5521 ttgaggagga ggataacttt ataagaagac cagcagcctc aactaacctc tacccttgag
     5581 atctctccga cactgagctg tgaaccagga agcatacaca agtacatccc aggccccaat
     5641 atatacagcc gagagtacct tctgatcagg cctcagtgag agaacatgca cctcaccctt
     5701 gaaagacttg aggccccagg gagtggagag gcctggcgag gtttcagggg ccatcttctt
     5761 ggagataggg gttagggaga agaatgggtt gaggaactgt cagagggcag attgggaggg
     5821 gataagaact ggaaaaatta ttcaaaaata atttttttaa aatggtaaaa cagacaaata
     5881 aaaaaacaac ccagagtatt ttaaaaactc ttctttgatt caattcttag cctcttgcct
     5941 aagcctctgt aatctttccc tccatattac agaagttgtc attgggttta gagctccaaa
     6001 ttatctcagg tttttattct catattttgt attcttctgg tcagtggctt atcttatctt
     6061 attgtggaat acttttttca taaaatacaa tttagatata aacatattct aaaaagggaa
     6121 ggttactaac cactacaatt aatcttggtt tatattttca tgggaatatt ttgtttcctc
     6181 ccaccacaaa caacatcatt gtgataaaaa tgtaaaaggt gctaagagct gagataatgc
     6241 tgttacatag gtataaataa tctaggtttg gtaatttaac tggggttatg tgatatgacg
     6301 tatgatttag ttaggaatgc atactgcaac agtgctaaac atggaagata gaatacttca
     6361 tttgtcagga aaacactaag cattcataat gttcacatac atgaaacagt tttatgtcag
     6421 ataggaattt aagtaaagtt ggctgagaat accttttaac tttttctttt tttattattg
     6481 gatatttttt atttacattt aaatgttatt ccatttcctg gtttcccgac gttagtccct
     6541 tatctcatac cgttcccctt cttttataag gttgttcgcc ctccacaacc actccccttc
     6601 ctgcctccac ccaccccccg acattctcct agattggaga gtccagtctt ggcaggatca
     6661 agggtttctc cttcaattga tgatgaacaa ggcaatcctc tgctacatat gcagctggag
     6721 ccatgggttt gtccatgtgt agtgtttggg tggtggttta atccctggga gctctggttg
     6781 gttggtactg ttgttcttat agagttggaa gccccttcag ctccttcaat cctttctcta
     6841 acttctccaa tggggaaaac acattcttag gtcaatagtt gactctgagc attctccact
     6901 gtatttatca tactctggca gagcctctca ggagacagct atatcaggct cctttcagca
     6961 tgcacttctt ggcatcaaga atattgtctg ggtttag
//
