LOCUS       XM_039092639            7597 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 431-like
            (LOC108348123), transcript variant X1, mRNA.
ACCESSION   XM_039092639
VERSION     XM_039092639.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092639.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7597
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7597
                     /gene="LOC108348123"
                     /note="zinc finger protein 431-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 31 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:108348123"
                     /db_xref="RGD:11430399"
     CDS             4193..6121
                     /gene="LOC108348123"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038948567.1"
                     /db_xref="GeneID:108348123"
                     /db_xref="RGD:11430399"
                     /translation="MLCFVHMNVIFEKAVTYDDVHVTFTREEWALLDPSQKSLYKDVM
                     LETYRNLTAIGYYWEDDSIEEDCQNSRRHGRHLQWNEGIHTGEKTYEGVQYKEGFATV
                     SDLHTIKRTLTGDFVYYSTVQVNRKAQTGEKPDGFNQCDNTFVCNNHLRFHKKRNTGE
                     KHYTCDQCCKAFAQISSLQRHKKTHTGEKPYACNQCGKALAQCGHLQNHTKPHTGGKP
                     YECNQCGKVFSWQNSLQNHKKTHTEEKPYECNQCSKAFSQYGHLQRHKRTHTGGKSHQ
                     CHQCGKTFAYRSRLRNHTRTHTGEKPYECNQCGKAFSWYNTLQIHKRTHTGEKPYECN
                     QCGKVFSWYNTLQIHKIKHTGKKPYECNQCGKAFACHSYLQSHTRTHTGEKPYECNQC
                     GKVFSWYNTLQIHKIKHTGEKPYKCNQCDKAFAYRSYLQNHTRTHTGEKPYKCNHCGK
                     VFKWCSTLQSHKRTHIGEKSYACNQCGKAFACHKYLQNHTRTHTGEKPYECNQCGKAF
                     AHHSHLQSHKRTHTGEKPYECNQCGKAFAHHSHLQSHQRTHTREKPYECNHCGKVFTW
                     HSTLQRHKRTHTGEKPYECNHCGKVFTWHSTLQRHKRTHTGEKPYECNHCGKVFTWHS
                     TLQRHKRTHTGEKPYACN"
ORIGIN      
        1 cggtgctctt aacctctgag ccatctctcc agcccgatat tgttcttctt atggggttgc
       61 gagccccttc agatccttca ttcctttctc taactgctcc aatggggcat tttgagtgtt
      121 ggaattgagg aaatgtacta aggtgcccag attgaacact aaattttatg gtgctagttc
      181 tctctctctc tctctctctc tctctctctc tgtgtgtgtg tgtgtgtgtg tatctgtctg
      241 tctgtctgtc tgtctctctc tcccttctgt ctctctctcc taccaaaaga attttattca
      301 tgaatatatt tgtagaaata ttttactcac gtgcatggtt ttgtcctacc ctgttcatgt
      361 atgtgaggca gacaggtaag gaggctgtgt aaaaaacctt agaacttgag ttacagatag
      421 tgagctgctt atatactggg aatgaaagct ggatgctcct gaagaacatt ctgttttctt
      481 aatttttcag gtatttttgc ccccatattt tcttatacct gatgttctgt ccaaagcact
      541 ctaggtcact tgcagaacaa acttctgttc atgtgttcct ttatcaaata gggaagggaa
      601 ccatggtaag agatgagaat aaaaacctgg cacagactga ctttgcaacc tggtatagaa
      661 atgggggagt ctaattccag ccaatcattg ccataatatt tttttttccc cggggctggg
      721 gaccgaaccc aggaccttgc gcttcctagg taagcgctct accactgagc caaatcccca
      781 acccccattg ccttaatatt taaaatacag tacaattaag ggaaatatat ccaggcaact
      841 atcagtcaaa ttctaggtac acaatatact ttatgttttg actacataga aaccatttta
      901 tgaggtacac atactacaag aataggttct tttttgaaat gacctagaat ttagtataat
      961 ctctgacaaa aggcacagag gtaaaaaaca ttttccctaa ggttgataaa cagtctaggg
     1021 aagggggtgt gtggaataat tgttcagcag aagttggata atatctgcct ctacagataa
     1081 ctgtaggtaa agtttgcctt caaaaaggaa agaggaaggg taggacagca cgttgtgggt
     1141 ggtgccatcc ctgggctggt agacttgggt tctataaaaa agcaagttga gaaacccagg
     1201 ggaagcaagc cagtaagtaa catctctcca cggcctctgc attagctcct gcctcctgac
     1261 ctgcttgatt tcccttggtg atgaacagga atggagaagt gtaatctcca taaacccttt
     1321 tctctacgat tacttcttgg tcatgatgtt tgtgcaggaa tagaagccct gacagtgaca
     1381 gctgataagc agtctacatt ctcagtgtca tttactttat tttcagctaa cataccaagc
     1441 tacaagatga aaattccaca gtcatttctg cctatcattt ttatgattta aatatgtttc
     1501 tttatgactt tgaactaaaa tgcccataaa tatgtctgct tctacactgt gaccatgttg
     1561 agacaaggac tagtagcaag caacccttta tgtgaacaca accagaatcc gtattcaaaa
     1621 tctcacggct tcctttattt aataaaatca ttgtttggaa atgaatccca agctctcctt
     1681 gcctgacaaa ataaagaggg aatcttcctc agctcttcgt tcttgcctgt tgaactggtt
     1741 attttgagaa tcaagttgac tgcatatgga attagctaaa gccagagaat tgagtgctgt
     1801 gggggtttta gtttcagtat agcttatgaa gtgggaaaca gttctatatt ctatatcctg
     1861 aagccttgca cattttaaga tccacgtcaa tgaggtgctt ttcctctgtc tacctagtgc
     1921 tggtattaag ctaatctagc cagctcgctc ttcctttttt tttttttttt ttccttactt
     1981 gacataaata tatatgtata ttttaattta ttcacttttc atcctcctac tacctccatc
     2041 acgctctccc tccatcttcc cctcaacacc tcctatcatc ttctcctgtg agtgggtaga
     2101 cactccctgg tcattacccc atccatagca cattagttct acgctatgct aggcacttct
     2161 tttggcactt aggcctgata agtctgccct actgaaagaa aaaagtatct catatacagg
     2221 caacagcttt tgccatagcc cctgttgcag ttgtttggga cccaacgaag gcccagctgc
     2281 acatctactc catatgagca gggagtcata ggtccagccc ctgggtattc cttggtcatt
     2341 ggttaaaact gtgagaacac aaagcgctga ggttgggtga ttctcttgat tttcctgtgg
     2401 agttcctctc ccctgagagg cccacaattc ttcctccaat ttttcataag agtccccaag
     2461 gtccatcaac tgtttggcta gggatgtctg tatctgtgta agtcaggtgc tgggtaaaac
     2521 ttctcagagg ataacatgct cctgtctgaa ggcttatcag agtatcatta atagtattag
     2581 ggattgatgc ttgtccgtgg aatggatctc aatatggcct ggttattgga tggcaattcc
     2641 ctgagtctct cctccattct ccatgcatgc atttgttgta gacaggatac attttgggtt
     2701 aacattattg tgagtaggtt ggtctcccta ttgcactact ggggttcctg cctggctaca
     2761 gaaggtatcc tctttaggtt gttatcccca atgtagtgag ctacagctaa ggtcacccac
     2821 attgcttctt gattgcctta gttatcctat ggagatgttc ctcacctcct tgcccctgtc
     2881 agttgcagat ttatagtcat tttctggcca tccagccatt tctcctgtcc ttcctgaatc
     2941 cccattctcc ttcccattcc ctctccattc tgggtcctca cctccacatt cctctcatga
     3001 ctgttttatt ccttcctctg tgtctgtgga gtatagcatg gtacctgtat gatatagcga
     3061 gtgttgacta ataagtgagt ccataccatg catgtccatc ctatggggac cggattacca
     3121 cactcaggat tatgtcatca agttccttcc atttccctgc aaaatttatg atgtccatgt
     3181 tttttaatag gtgaatagta atctgttgtg tagacatact gcattttctt tattcattct
     3241 tcactcaagg tacagctagg ttgtttcctg tttccagcag gtaggataaa gctctaggaa
     3301 tttagcctag caaatctttg ataaaatcca ataccccttc atgttcaagg tattagagaa
     3361 ttctgacgta aacatattca taccatttaa atcaagacaa tagccaatat caagctaaat
     3421 ggagagaacc ttaaagcaat tccactgtaa tcaggacaaa acaaggctgc cttctttctc
     3481 cctatctatt caatagagta cttgaatttt tagggagaga aatagaaaaa aaaaattaaa
     3541 tgagatcaag gagataaaaa ttggaaagaa gaattcaaag tagagttgtt tactaatgat
     3601 ctgatagtat aagtgagtga cccccaaaat tctatctcag aggtactgca ggtgatccac
     3661 accatcagca atgtcatgga tacaaaatta actttacaaa acagtaggcc tcctttatat
     3721 aaatgataac tgggccaagg aagtaataag agaagcaaca tactttacat tagccactac
     3781 taatataaat aatctttttg taactatccc agcaagtgaa agatctctct gataagcatt
     3841 tcaaatccct gaagaacaaa attgaaaaag attttaaagg aagtaaacat tttccatgct
     3901 catgaatagg taggatttgt agtaaaaatg gccatcttac caaagactcg gtgcttttgt
     3961 agtcagtaat tatttataca acatctatga tgtgtgctta gcattgttat tctatttact
     4021 ggtctcttta ggtctctcaa gtagcatttc ccttgcaagg gtatatctta ttcaaaaggt
     4081 gaggaagtga gagttttgaa ccttatcatt cagtacaaat tttcaaacat taaataagtg
     4141 gggaaaacgc cagaatgatg gtcagtgaaa tatacatgct caatatgtaa acatgctttg
     4201 ttttgtacac atgaatgtta tatttgagaa ggcagtgaca tatgatgatg tgcatgtgac
     4261 ctttactcgg gaagaatggg ctttgctaga tccttcccag aagagtctct acaaagatgt
     4321 gatgctggag acctacagga acctcactgc tataggctat tactgggaag acgacagtat
     4381 tgaagaagat tgtcaaaatt ctagaagaca tggaaggcat cttcagtgga atgaaggaat
     4441 tcacacggga gagaaaacct atgaaggtgt gcaatacaaa gaagggtttg caactgtcag
     4501 tgatcttcat acaattaaaa gaacacttac tggagacttt gtatactata gtactgttca
     4561 ggtaaacaga aaagcacaaa caggagagaa acctgatgga tttaaccaat gtgataatac
     4621 ctttgtatgc aacaaccatc tgagattcca taaaaaacgt aatactggag agaaacacta
     4681 cacatgtgac caatgttgta aagcttttgc acagatcagt agtcttcaaa ggcataaaaa
     4741 aacacatact ggagagaaac cctatgcatg taaccaatgt ggcaaagccc ttgcacaatg
     4801 tggccatctt caaaaccata caaaacctca tactggagga aagccctatg aatgtaacca
     4861 atgtggtaaa gtcttttcat ggcaaaactc tctgcaaaac cataaaaaaa cacatactga
     4921 agagaagccc tatgaatgta accaatgcag caaagccttt tctcaatacg gccatcttca
     4981 aagacataaa agaacacata ctggaggaaa gtcccatcaa tgtcaccaat gtggtaaaac
     5041 ctttgcttat cgtagtcgtc ttcgaaacca tacaagaact catactggag agaagcccta
     5101 tgaatgtaac caatgtggta aagccttttc atggtacaac actctgcaaa tccataaaag
     5161 aacacatact ggagagaagc cctatgaatg taaccaatgt ggtaaagttt tttcatggta
     5221 caacactctg caaatccata aaataaaaca tactggaaag aagccctatg agtgtaacca
     5281 atgtggtaaa gcctttgctt gtcatagcta tcttcaaagc catacaagaa ctcatactgg
     5341 agagaagccc tatgaatgta accaatgtgg taaagtcttt tcatggtaca acactctgca
     5401 aatccataaa ataaaacata cgggagagaa gccctataaa tgtaaccaat gtgataaagc
     5461 ctttgcttat cgtagctatc ttcaaaacca tacaagaact catactggag agaagcccta
     5521 taaatgtaac cattgtggta aagtctttaa atggtgcagc actctgcaaa gccataaaag
     5581 aacacatatt ggagagaagt cctatgcatg taaccaatgt ggtaaagcct ttgcttgtca
     5641 taaatatctt caaaaccata caagaactca tactggagag aagccctatg aatgtaacca
     5701 atgtggtaaa gcctttgctc atcacagcca tcttcaaagc cataaaagaa cacatactgg
     5761 agagaagccc tatgaatgta accaatgtgg taaagccttt gctcatcaca gccatcttca
     5821 aagtcatcaa agaacacata ccagagagaa gccctatgaa tgtaaccatt gtggtaaagt
     5881 ctttacatgg cacagcactc tgcaaagaca taaaagaaca catactggag agaagcccta
     5941 tgaatgtaac cattgtggta aagtctttac atggcacagc actctgcaaa gacataaaag
     6001 aacacatact ggagagaagc cctatgaatg taaccattgt ggtaaagtct ttacatggca
     6061 cagcactctg caaagacata aaagaacaca tactggagag aagccctatg catgtaacta
     6121 atattgtaag gcccatgcct atcataggga tcttcaacgt cataaaagaa cacacacaga
     6181 agagaagccc taggaatgta accaagcact ctgcctgtaa gcaacatggc atagcctttg
     6241 cacaaaacag aaatcttcaa tggcataaaa ccatcacata caccaagaat ttctgtgaat
     6301 gcaaacgaca tgataaagct tttgcatttc tgaaaagcca taaaagaact catactggag
     6361 agaagcggag tgtatttacc taatgtggca aaacctgtgc acgcaaaaga attcttgaaa
     6421 ggcattaaaa aaaaaaatca catactgctg agaatttttg tgaatgtaac taatgtaata
     6481 aaccctttac agattacagt gatcttcaaa ggcataaaag aacattctac agagaagccc
     6541 aattaactta acctatattg taaatatttt tcctttcaca gtcaacatca aagtcataaa
     6601 agaacacata ctagagaaaa acccttggta aatcttttga acagaatagt gagtttagag
     6661 tcaaaagaac agattctata ctataaagaa ctcttttgaa tataattaat atggtgaagc
     6721 ctatgtatgt taatggccat ttgcaacgtc ataaaatata acatgatgtg cagaagtcct
     6781 atgaatgtaa gggatctggt aaagccattg tacacaactg tgatcttcaa aggcataaat
     6841 gaatacatcc tagagagaag ccctttaaat ataatcagtg ctgtaaagcc tttgctcatt
     6901 atggtggtct tcaaaaaaat tccaaatgac accatgcagt gagcccctat gcatatatca
     6961 acttgataaa gcctttgcat atcagagtca acttctaatg catgaaagga ttcatatagg
     7021 agagacacag tgagtttctg tgtctgactc ctttgcctga acttgcagtg cttttccaac
     7081 tagttaatta ccttccctag ctttgatagg atttatgcct attcttattt tcacatgtga
     7141 tgtggtgttc agttgctatc cccaggatcc tgctcttttt ttttttttaa atcaaaatgg
     7201 cagagctgtg gttctggctg tgaatgtagg ttgggagagt catagagaag tgttcagagg
     7261 gtgacccaac ccaggaacaa aacctttagc ctataatctt tcctacttga aagatgtgct
     7321 gatgtgatgg taacacagaa gttgttggat tgccaataat tgactggttt actttgaaac
     7381 ccatgacaga agaaggagcc tgtaaatgat atgtctcact gttaagaaaa tttggggact
     7441 tatccagctg caggaacagt gcttagaaga gccaagattt tattacatgt actagcagcc
     7501 agtttctgct tctggtgtgt taaataagtt agccattttc cagagcttat tcaagatttc
     7561 acaatctaga aataaatgat caagtgtttg taaatta
//
