LOCUS       XM_039100877            4024 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein OZF-like
            (LOC108348090), transcript variant X1, mRNA.
ACCESSION   XM_039100877
VERSION     XM_039100877.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100877.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4024
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4024
                     /gene="LOC108348090"
                     /note="zinc finger protein OZF-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 14 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:108348090"
                     /db_xref="RGD:11436011"
     CDS             49..1821
                     /gene="LOC108348090"
                     /codon_start=1
                     /product="zinc finger protein 883-like isoform X1"
                     /protein_id="XP_038956805.1"
                     /db_xref="GeneID:108348090"
                     /db_xref="RGD:11436011"
                     /translation="MEKEVLSRYRVLGYMKKSNGSVSFEDVAVDFSWDEWQHLDVAQR
                     RLYRDVMLENYSSLLFLGRCMTKPEVIFKLEHGFGPRPVVDSSVRSLPDLKVARKLQP
                     GTASQEDKGCVRALIQQPQHTRGRRSHARKKSGRHKSPLSHCQRPLNEETLCTHRQHR
                     KSQVTGQRSHGGEKPYENSGCGKASHTKSQHQSTPRDEKPYKCLECGKYFYYKSQIIE
                     HQRSHTGEKPYECTECGKSFSYKSHLTVHHRSHTGEKRHECTECRKVFYYKSQLTRHQ
                     RSHTGEKPYECMECGKSFYCNTHLTLHQRIHVNVKPYACTECGKTFSFSACLTRHQRI
                     HTNEKPYECTHCPKAFYFKKQLTHHEKTHTTEKRFECKQCGKAFYWRANLTVHQKTHG
                     GEKPFECKQCGKAFYCKSHLTVHQRTHISEKLYQCSQCRKAFYSQAQLVVHQRIHTDE
                     KPYECKQCGKTFYSKSGLTAHQKTHTGEKPYACKECGKAFYNKYLLIEHHRVHTGEKP
                     YQCTECPKAFYCKKYLSLHQKTHASEKSFYCAECGKAFSWMSHLTQHQRIHTGEKPYA
                     CEHCKKTFYFKKQLTRHQRTHERP"
ORIGIN      
        1 ctctgccacc cacctacata gagagggagt ggataaggaa agaaagagat ggagaaagaa
       61 gtccttagtc ggtacagggt gttgggttac atgaaaaaaa gcaacggttc cgtgtcattt
      121 gaagacgttg ctgtggactt ctcctgggat gaatggcagc atctggatgt ggcacagagg
      181 agactctaca gggacgtgat gctggagaac tacagcagcc tcctgttctt gggacggtgc
      241 atgaccaaac ctgaggtaat cttcaagttg gagcatggat ttgggccacg gcctgtggta
      301 gactcctctg tccgcagcct tccagacctg aaggtggccc ggaaactcca acccgggaca
      361 gcatcccagg aagataaagg atgtgtgagg gcattgatcc agcagcctca gcacacgagg
      421 ggtcggagga gtcacgcacg taagaaaagt ggtcgtcata agtcacctct cagtcactgt
      481 cagaggcctc ttaatgagga gacactgtgt acacacagac agcacaggaa gtcacaggtg
      541 acgggacaga gaagtcacgg aggggagaag ccatatgaaa actcaggatg tgggaaagcc
      601 tcccacacca aatctcagca tcagagcact cccagagacg agaagcccta caaatgtctc
      661 gaatgtggga aatatttcta ctacaagtca caaatcattg agcatcaaag aagtcacaca
      721 ggtgagaagc cttatgagtg tacggaatgt ggaaagtctt tcagctataa atcacacctc
      781 actgtccatc acagaagtca tacgggtgag aagcgtcatg aatgtacaga atgtagaaaa
      841 gtgttttact ataagtctca acttactcga caccagagga gtcatacagg ggagaagccc
      901 tatgaatgta tggaatgtgg gaaatctttc tactgtaaca cacacctaac tctgcaccag
      961 agaattcatg taaatgtcaa accctatgca tgtacagaat gtgggaaaac cttctctttc
     1021 agtgcatgcc tcactagaca ccagaggatt catacaaatg aaaagcctta tgaatgtaca
     1081 cactgcccca aagctttcta ctttaagaaa caacttactc atcatgagaa aacacatact
     1141 acagagaagc gctttgaatg taaacagtgt ggtaaagcat tttactggag ggccaacctc
     1201 actgtgcacc agaaaactca tggcggggag aagccctttg aatgtaaaca atgtggtaaa
     1261 gccttttact gcaagtccca cctcactgtg caccagagaa ctcatataag tgaaaagctc
     1321 tatcaatgct cacagtgcag gaaggcattc tactctcagg cacagcttgt tgtacatcag
     1381 agaattcaca ctgatgagaa gccctatgag tgtaaacagt gtggcaaaac attctacagc
     1441 aagtctgggc tcactgcaca tcagaaaacg catacggggg agaagcccta cgcatgtaaa
     1501 gagtgtggga aggcgttcta taacaagtac ctgctcattg agcatcatag agtccatacg
     1561 ggcgagaagc cctatcaatg tacagaatgc ccgaaagcat tctactgcaa aaaatatctt
     1621 tctctccatc agaaaactca cgcaagtgag aagtcatttt attgtgcaga gtgtgggaaa
     1681 gctttctcct ggatgtcaca cctcactcag catcagagaa ttcatacagg tgagaagcct
     1741 tatgcatgtg aacactgtaa gaagactttc tacttcaaga aacagctcac tcgacatcaa
     1801 agaacacatg agaggccatg aggtgtaaat aatgcaagag accatttcac tgcaaatgga
     1861 acctctctgt gcatgaaaga actcaagcaa gggagaaacc ctgtggtgag tgtagcagat
     1921 acagacattt ttgtccctca tgcatccctt actccaagtc agatgaactc ctgctgaagt
     1981 gtatcatcag gaatgattaa tgtaaaacct gtggacattt tctagtgtaa gtcaggtcac
     2041 tcaaccaatg agcctatact ggggtctatc tgcaaacact gttggaaggc atgttcctca
     2101 tactgtgtgt aagagagttc atgcatgggg ctgtctccta tggagttaaa cactatacca
     2161 tagctttctc attcttccca ttacttcagt gtattgtagg tggggtaaca cagaacataa
     2221 aggacagagg aaggtgttcg aacattaaac cccatcagtt cacacctgaa agcttttaca
     2281 ggtgcaggcc cagtgacatt aatgaaaata gacacatttt gagatagaaa ttggacattt
     2341 aggaacttgt tatgtgatat gtcacataga gcaaaaagca aagcgagatg aattatttca
     2401 tgctttcaat tctaggtcct gatactgcag gtttactggg actcagcgat tgaagattga
     2461 acttagcatc ataggcaggt tccgtttgat ataaagtaga aaagccttgt tgaagtgccc
     2521 atgtcaagtt atgacattgc agccccggtg ttgaaaaccc atataaattc ccagatatga
     2581 agagtataag gagtaccaat acttttgaaa tgaacttaaa atttaaccta gaatcattaa
     2641 accaatacac aggattaaac ataagattcc agtatgaaga cattcttgct tctgtcattc
     2701 cagtgacttc attgcaaaag ttcaactatt catagtgtaa gagcattcac agtaccagcc
     2761 ctcagacagc tcacgaacat gagagcatat ttgaagctca cacagtaact tgtcttaaac
     2821 gcggctcagt ggctgtgtgc tcatcagtcc tgtgctgtgt gtctgcacat agaactttcc
     2881 acgtgtcatc ttgatttaga atatttttgt tcatgttcat ttgtaaatca gttcaaactg
     2941 tccacaagat tgaatgcctt atcaggtatg aaaattttaa tgtgttttca ttcttataat
     3001 tatgtagttt tgagaccaac tcttgatctg tagccagtct gtcctctggc ctccacttgt
     3061 acacaggtat gttcccccca ccccccacag gcatacagaa agaacattta ccaataatag
     3121 aaaaacacca aatttttaac acagtgggaa attgtaaaac attggtatat gtaattttca
     3181 tgttaacctt cataaggaat tttgcttaaa tatgttgcgt gcaccttaac ccgggaggtg
     3241 agattgcatt acccacttag ctctgggatc tattgcaacc atccccaccc tggcttcctt
     3301 ttctaagccc ctttgcttgg gcttgtctcc gagattggct gctgtcagcc ccaacctggc
     3361 ctctctctac ccaccccatg ctccaccagc tcactctcat gaccctagag tccgcagaca
     3421 aaggacacac agacagcctt attgtagaac ttgccagcta ggcacaattc ctgggcacag
     3481 aatctcccgc ctggaaaggc atgccctcat caattatttc cttttctcct cctgccctaa
     3541 actctgtggt ttgtatcagc tagcccccgc caccctcctt ggctccctac ctgtagtgga
     3601 ggctgctggc tctagctgcc ctgaggcctt atatgattgt agcatcctct ttcctcccaa
     3661 gtatggcgga aaggccctct ctctttccct ttatctcttc ctcctcttgg gacctggaag
     3721 tcccacatgt accttccgcc cagcaattgg ctcctggcct tctttgttgt caaatcaaga
     3781 accaattagg gaagtaagaa acttaatatt tcttgccaat atctactagg cgatttcttt
     3841 acttagattc ctcttcttta ttgcaatcct ttggatcaaa cctccagact caggcatgct
     3901 aggcaaatgc tctaccatga ggtataggtc cctagacaat gttttaatga atctgtcgtc
     3961 attaccagag ttttgtagat gaaactaatc tattaaaggc catacataca tattgttaaa
     4021 tgta
//
