LOCUS       XM_039098147            5544 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus spore coat protein SP65-like
            (LOC103694360), mRNA.
ACCESSION   XM_039098147
VERSION     XM_039098147.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5544
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5544
                     /gene="LOC103694360"
                     /note="spore coat protein SP65-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 18 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:103694360"
                     /db_xref="RGD:9330218"
     CDS             2249..3301
                     /gene="LOC103694360"
                     /codon_start=1
                     /product="uncharacterized protein LOC103694360"
                     /protein_id="XP_038954075.1"
                     /db_xref="GeneID:103694360"
                     /db_xref="RGD:9330218"
                     /translation="MGVTTLDVGVTILSIGVTNLDLGVTTLDVGMTTLDVGVTTLDRG
                     VTTLDVGVTILDVGVTILSIGVTNLDLGVTTLDVGVTTLDGGVTTLDGGVTTLDGGVT
                     TLDGGMTTLDGGVTTLDVGVIGVTTLDVGVTTLDVGVTTLDVGVTTLDVGVTTLDVGV
                     TTLDVGVTTLDVGVTTLDVGVTTLDGGVTTLDGGVTTLDGDVTTLDVGVTTLSIGVTN
                     LDLGVTTLDVGMTTLDVGVTVLGVGVTTLDVGGTVPWAKASSTSALIFLFPGGGAHRD
                     QLPKTPTTMTSPARSNESKSTTSSSSFGWIFPPSNEKCNRYTYLLKFPLLGILYPSAF
                     SVHCGRQNNSPRMSVC"
ORIGIN      
        1 aaacaggtcc acttcccctg tatcccttct ttcccactac ctctggtggg tgatgggcta
       61 caagggaggt taaagcgttt aagaaccatt atcaaaaata cggtttgaat aattaaaaaa
      121 tacaatgcat gctgagtgac atcacaagca atgccttcta agtcggacca agacagatgt
      181 gctaaagaga tttcaagata tctgaataca gtgtctatat catgcaatca agtcgacccc
      241 tcacagacat gtccgcaggt caggttgttt tgggcagttc ctcagttaag acacctgaga
      301 aaagtctcct taactcctgt caggtgagca aagcaagctg gacagtggct gaggtcactg
      361 ggctgtgttc ttcatcgcaa cacctgcagc caacatcaaa ctcagaggaa tttcaatgtc
      421 tatttctcat atttaaacaa aatggggctg ggcatgtggc tgtgtcagtc agtagagcgc
      481 ttgccaagct taatgtgaag ccctggggtc catctccagc acggaatgag ctgagtatta
      541 tggtatatgt gtgtaatcct agcacctgtg agaaggaggc agggggtgac caggagttca
      601 aggtcatcct cagctaaagc aaattcaagg ctagcatggg ctacataaga cctgtttcaa
      661 aacaaaagta taaaacagaa gcaaaagtga tatattgtcg caatctcatg gtagctacgt
      721 gagctcccct ttcaaaccat aggactctga gttagtaaca gtctttccag ttctatctgt
      781 ggaatcaaaa cttgacttta cactccctgt atctctcctt gctggccagg ctttatcagt
      841 tagctctgaa tttatctcgt gtccctgtga taagcagaat tggtacactt atctctgagc
      901 cctttggtgg aaagggtatc ggccaacagc gcagaaatga cgatatcagg caggaattgc
      961 gccttaatct acaatctaac gggctccatc ttccactctg ctcctatctg cattttatta
     1021 tatactcaag ccagttatac acggctcacc gagaaaatgc attttatgat cttgttagaa
     1081 gaaatggttt cactgggatc attttaagcc aataatttca tactttcctc ctcctcaata
     1141 cctgggacat taacttatta gccactctgg tgtcaagcct aatgtgtttt aaatacttaa
     1201 aataaattcc aggcaactcg gggctggaga ctggattttc tgccggcatt gagtgcttat
     1261 ggttacatgg ggggaactgg tcttagactg tgaggggaag gcttggctat ctgcttctgg
     1321 tgcacaggaa gcttggtgtc agctggactg cggaagtcct gaattcctgc tgactgagcc
     1381 acctctccag atcccctttt tattgcaaaa ccctgtaacc tcgggcattt ccaccggaac
     1441 cccagttccc gaacagtgat ttattgttta ctaataaatg ccaaggccaa aagctgggct
     1501 tgttccccta tcagcttgga actcaaccca tttatcctct tctatgtctg ccacatgggt
     1561 gttacctctt ctcagtttca gtttcttatg tctgactttc tccaagtctg ggtgttaaat
     1621 cctcctgcct gactatttcc cagagttcct ctctcttgct gcagaatgac tcaccttcta
     1681 accctgcctc agcttattgg ccattggatt ttgactgaca ggtgatgctt ccactcatta
     1741 cacaggagat tgtccgggca tgacccttgc caaccctctt ggaaggccct gagtgtgttg
     1801 ctggctttga gattctgtac tctgctggtc cactgctcca gagtcacacc ttctggcctc
     1861 tcttcttctt gtcactatgt catcttacca gcatcgtctt cttggcctac cgtgatgatt
     1921 aatattgatt gcagtgtgac acaatctaga gcagtggctc tcaacctccc taacgctgcg
     1981 accctttaat acagttgctc atgttgtggc gactccaggg ataaaattat tttcattgct
     2041 actttataac tataattttg ctgctgttac ggatcataat gtggtttctg atggtcttag
     2101 gtgacccctg tgaaaccatc tttcaaactc caaaggggtc ctgacccaca ggttgagaac
     2161 cactgatcta cagtgatcta aaacacaagc ctttgagcat acctttgagg gaagttttag
     2221 gttgagttga ggtgtgacaa ccctggatat gggtgtgaca actctggatg tgggtgtgac
     2281 aattctgagt ataggtgtga ctaatctgga tctaggtgtg acaaccctgg atgtgggtat
     2341 gacaaccctg gatgtgggtg tgacaactct ggatcgaggt gtgacaactc tggatgtagg
     2401 tgtgacaatt ctggatgtgg gtgtgacaat tctgagtata ggtgtgacta atctggatct
     2461 aggtgtgact accctggatg tgggtgtgac aaccctggat gggggtgtga caactctgga
     2521 tggaggtgtg acaactctgg atggaggtgt gacaactctg gatggaggta tgacaactct
     2581 ggatggaggt gtgacaactc tggatgtagg tgtgataggt gtgactaccc tggatgtggg
     2641 tgtgacaact ctggatgtag gtgtgacaac tctggatgta ggtgtgacaa ctctggatgt
     2701 aggtgtgaca actctggatg taggtgtgac aactctggat gtaggtgtga caactctgga
     2761 tgtaggtgtg acaactctgg atgtaggtgt gacaactctg gatggaggtg tgacaactct
     2821 ggatggaggt gtgacaactc tggatggaga tgtgacaact ctggatgtgg gtgtgacaac
     2881 tctgagtata ggtgtgacta atctggatct aggtgtgact accctggatg tgggtatgac
     2941 aaccctggat gtgggtgtga cagttctggg tgtgggtgtg acaaccctgg atgtaggcgg
     3001 cactgttcca tgggctaaag caagctcaac atcagccctc atctttctgt ttcctggtgg
     3061 gggggcacat cgtgaccagc tgcccaagac ccctaccact atgacttctc ctgcccggag
     3121 caatgagtca aaatcaacta cctcatcaag tagctttgga tggatatttc ctcccagcaa
     3181 tgagaaatgt aacaggtaca cctatctttt aaagttccca cttctcggga ttctgtatcc
     3241 atctgccttt tctgtccatt gtggtaggca gaataatagc cctaggatgt ccgtgtgcta
     3301 attttgagaa ccagtgacgg tgttctgctc caaggaccag tgacagtgtt ctgctgcacg
     3361 gccaggagac tctgcatgcg tatgtggatt gtggatttcg aaaggggtca cctcctgaac
     3421 tctccgggtg gagggctttc ttaggctggc cacagggaag ataaagtaga agagtggatg
     3481 cagttgcaag ggtgagccat gctggctttg gagatggaag gagggaagac tggtcctgaa
     3541 tgtgggcggc accatcccat gtgctggggt cctggcttaa tgaaaaagga aacgtgggag
     3601 aagtcaggtg cttgctggtc ctgctcctgt cccagatttc ctgctcccag ctccatgaac
     3661 tctgccatgc cttcctgtca tgatggctac cacgctctcg aaccagagcc atgttaaatc
     3721 tttcctccca gactcgcatt ttgtcccata tttggtcaga gcaatgaggt cccgaatgca
     3781 gatacctaag tgtgcactga gctccacaca cttccctgcc cactttcctc tgtcggctgg
     3841 ccgtcgccaa gagaggggcc aactgctacc attgctctct ctatcagtca gggtaacctc
     3901 atctccacca tttcagtgtg tgtatttaaa aggacagctc atgcctagtg cacaaggtcc
     3961 tgttgtctca gcttccgccg tacgtgtggt cattaacttc tttcactggt cacctgtgtc
     4021 cgcccctgga atattaactc acattaattt tttctagata cattttatct gtttaccagg
     4081 ggataacatc ataggtgaca gacatcagag atccacactc gttctcatta ctgtcgaagt
     4141 tgctgagtgt gtggaccagt tcggtctagc gccatggtct gccagttcta tttctcaacc
     4201 agctttgcat ctgaagctgc ctgttctgca gcagcttggc cccagcctgt gcgggaccag
     4261 ctcgtggcgc tgtgctattg aatacagaca gatggacgca ggattgcaga atgtagtttg
     4321 ttgggcactt acggatgcat gacctcaaag atggcccaag accagcgggg tcctgggact
     4381 tcgtcagaag gattgaagtg gcttcatccc ggtggagtac ccctaccttg ctcagagatc
     4441 ccctacccct gggatgggtt gcaaagctcc aagtatctct tccagggttt catgtttgta
     4501 atttgctggt aaacatgtga gggaaagtga ccagggtcag tcggtagtgg taggggtcac
     4561 tcaggtagaa gttaacagtc aagaaggctg cattcatgta acttgggacc agacaagtat
     4621 cttccacaca cggtcacatc ccagactcct gcagcctcgc ctgtcatgta atctaatctg
     4681 gtccagccac aatgcacctc actggaccag gagcagccag gccatcctcc tgcagtaaac
     4741 ccttgaatga cttcactgtt tatcgggcaa aggcacactg cacactccca caagggacat
     4801 agcacagatg tgccctccct catttcttgc tgtgtccatc catcctttct ttcctaaatt
     4861 gtcctggatg ctcccatgtc cacttcccct gcacccccag ctcttggcat gtgaactctt
     4921 ggctgcttta gtagaggcca tgcccctcct ccttgtgtag gattcagtgc agtgtgcccc
     4981 tcccctgtcc tcaacctccg agaacactat ttttctaggt ccccacaggg ctttcccatc
     5041 ccagcctctc tccctcccgg tctccctgat gtggtaaata tctcataact atgccgttcc
     5101 ctcgtcagtt cacagggtcc tcagggccgc ggaacttaca gcacagggac aacgggggca
     5161 ccaggcgagc cacctggcac ctagcagggg ctcactagac acctgcctgc cgagtgagtg
     5221 aattggtttc tgtggctccg cgagttcagg ccaggctgtg ggacaagcgg gcacgacttc
     5281 tgccagtatt gatttgcagg caggactcca tgtgtaaatg catttcgctg ttctgcctta
     5341 ggacccaatt tctgaaaatt agattttaag tgtcgtgtcc tcctcgctca ctccgtgtgc
     5401 ttccagacaa ccagcacata atgtaaaatg aaaggcgtgg aaaatggacc cgtttagtgt
     5461 actccatttg aaatctgtta ggctattttt aaattctcat ggaccttgtg ctcctgaggg
     5521 tgggcaggag aggagaaaga agga
//
