LOCUS       XM_039097348             554 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L31 pseudogene
            (LOC103694271), mRNA.
ACCESSION   XM_039097348
VERSION     XM_039097348.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..554
                     /gene="LOC103694271"
                     /note="60S ribosomal protein L31 pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 100% coverage of the annotated genomic feature by
                     RNAseq alignments"
                     /db_xref="GeneID:103694271"
                     /db_xref="RGD:9438210"
     CDS             70..519
                     /gene="LOC103694271"
                     /codon_start=1
                     /product="60S ribosomal protein L31-like"
                     /protein_id="XP_038953276.1"
                     /db_xref="GeneID:103694271"
                     /db_xref="RGD:9438210"
                     /translation="MSTAVSSILFFFFFFLFIKKTSNLGPAERLPQRRWQEKKGCSAI
                     NRVMTREYIINIHKCTHGVSFKKFAPRALKEIWKFAMKEMGTPDVCIDTRLNKAVWAK
                     GIRNVPYRVRVRLSRKSNEDKDSPNKLFTLVTSGPVTTFRYLQTVSG"
ORIGIN      
        1 gctttgaact tctgggctga tgtgatgatc ctcacagcct gaggagctgg gactgcaggg
       61 cattgcatca tgtccaccgc agtatcttct attctgttct tttttttttt ttttctattc
      121 atcaagaaaa caagcaactt gggcccagca gaacggctcc cacaaagaag gtggcaagag
      181 aagaagggct gttctgccat caacagggtg atgacccgag aatacatcat caacattcac
      241 aagtgcaccc atggtgtgag cttcaagaag tttgctcctc gggcactcaa agaaatttgg
      301 aaattcgcca tgaaggagat ggggactcca gatgtgtgca ttgacaccag gctcaataaa
      361 gccgtctggg ccaagggaat aaggaacgtt ccgtaccgcg tccgagtgcg tttgtccaga
      421 aagagtaatg aggataagga ttcaccaaac aagctcttca cactggtaac ttccgggcct
      481 gttaccacat tcagatatct acagacggtc agtggatgag acctaaccgg ctgaatgtca
      541 aataaagtta caga
//
