LOCUS       XM_039094938             678 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L9-like
            (LOC103693978), mRNA.
ACCESSION   XM_039094938
VERSION     XM_039094938.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094938.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..678
                     /gene="LOC103693978"
                     /note="60S ribosomal protein L9-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins, and 95% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:103693978"
                     /db_xref="RGD:9159214"
     CDS             1..630
                     /gene="LOC103693978"
                     /codon_start=1
                     /product="60S ribosomal protein L9-like"
                     /protein_id="XP_038950866.1"
                     /db_xref="GeneID:103693978"
                     /db_xref="RGD:9159214"
                     /translation="MVDADSILAFFVPSTARKKTILSNQTVDIPENVDITLKGRTAIV
                     EGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVT
                     LGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDE
                     LILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE"
ORIGIN      
        1 atggtggatg cggattccat tctggctttc tttgtcccat ctactgcaag aaagaagacc
       61 attctcagca atcagactgt cgacattcca gaaaatgtgg acatcactct gaaggggcgc
      121 acagccattg tggagggccc caggggaacc ctgcggaggg acttcaatca catcaatgta
      181 gaactgagtc ttcttggaaa gaaagagaaa aggctccgtg ttgacaagtg gtggggtaat
      241 gggaaggaac tggccactgt cagaaccatc tgcagtcacg ttcagaacgt gatcaagggt
      301 gtgacactgg gcttctgtta caagatgagg tctgtgtatg ctcacttccc catcaacgtc
      361 gttattcagg agaatgggtc tttggttgaa atccgaaatt tcttgggtga aaaatacatc
      421 cggagggttt ggatgaggac aaatgttgct tgttctgtct ctcaagccca gaaggatgag
      481 ttaatccttg aaggaaatga tattgaactt gtctcaaatt cagcggctct gattcagcaa
      541 ggcacaacag ttaaaaacaa ggatatcagt aagtttttgg acggcatcta tgtttctgag
      601 aagggaaccg tgcagcaggc tgacgagtga gacctcagtt tcccagctcc agaaacaaga
      661 tcctgatcac aagtacaa
//
