LOCUS       XM_039091156             478 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L36a-like
            (LOC103693700), mRNA.
ACCESSION   XM_039091156
VERSION     XM_039091156.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039091156.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..478
                     /gene="LOC103693700"
                     /note="60S ribosomal protein L36a-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 long SRA reads, 16 Proteins, and 69% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:103693700"
                     /db_xref="RGD:9288957"
     CDS             1..456
                     /gene="LOC103693700"
                     /codon_start=1
                     /product="60S ribosomal protein L36a-like"
                     /protein_id="XP_038947084.1"
                     /db_xref="GeneID:103693700"
                     /db_xref="RGD:9288957"
                     /translation="MVAEGSSVPASRVQVSLPPEFTFFSSRGFINHSPSNSAVIGPEN
                     APANVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRCDRKQNGYGGQTKPIFC
                     KKAKTTKKVVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF"
ORIGIN      
        1 atggtagcag agggttcaag tgtccctgcc tcccgagtgc aggtgtccct gcctcccgag
       61 ttcaccttct tttcatcccg aggctttatc aatcacagtc cctccaactc tgcagtcata
      121 gggcccgaga acgctcctgc aaacgttcct aagacccgcc ggacattctg caagaaatgt
      181 gggaagcacc aaccccacaa ggtgacgcag tacaagaagg gcaaggattc tttgtatgcc
      241 cagggaaagc ggcgttgtga caggaaacag aatggctacg gcgggcagac taagcccatt
      301 ttctgcaaaa aggctaaaac tacaaagaag gttgtgctga gactggagtg cgttgagccc
      361 aactgcagat ctaagaggat gctggctatt aagagatgca aacattttga actaggaggt
      421 gacaagaaga gaaagggcca agtgatccag ttctaagctg attttgttat gaagacaa
//
