LOCUS       XM_039084918            2882 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 431-like
            (LOC103693502), transcript variant X2, mRNA.
ACCESSION   XM_039084918
VERSION     XM_039084918.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084918.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2882
                     /gene="LOC103693502"
                     /note="zinc finger protein 431-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     1 long SRA read, 9 Proteins, and 95% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     15 samples with support for all annotated introns"
                     /db_xref="GeneID:103693502"
                     /db_xref="RGD:9276623"
     CDS             374..2521
                     /gene="LOC103693502"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X2"
                     /protein_id="XP_038940846.1"
                     /db_xref="GeneID:103693502"
                     /db_xref="RGD:9276623"
                     /translation="MDVLTYDDVHVNFTREEWALLDPSQKSLYKDVMQETYRNLTAIG
                     YNWEDHTIEEHCQSFRRHGRHERCHTGEKPSENTQCGKAFAQHSHLQRHKSTHTGEKL
                     YECKPHDKAFTYDSQLQTLERIHTGEKPYKCSQCGKAFERHCNLGRHKLIHTGRKSNK
                     YNQCGKAFALQSHLKTHGITHTGEKPYKCDQCGKAFAYHSSLHVHKRIHTGEKPYVCD
                     QCGKAFAQLSHLQVHGITHTGEKPYKCDQCGKAFAHHSYLQVHKRIHTGEKLCECDQC
                     GKAFLSHSYLQVHKRIHTGENLYECDQCGKAFTSHSYLQVHKRIHTGEKLYECDQCGK
                     AFASHSYLQVHKRIHTGEKPYVCDQCGKAFARLSYLKTHGITHTGEKPYKCDQCGKAF
                     EHRCNLGSHKLIHTGEKPYKCDQCGKAFASHSYLQVHKRIHTGKKLCECDQCGKAFAS
                     HSYLQVHKRIHTGEKLYECDQCGKAFTSHSYLQVHKRIHTGENLYECDQCSKAFTSHS
                     YLQVHKRIHTGEKPYVCDWCGKAFAYHSYLQVHKRIHTGEKPYVCGQCGKDFVVPSEL
                     KRHKRTHTGEKPYKCNECDKAFVGQNDLKKHKRTHTGEKPYKCNECGKAFVFNFNLRA
                     HKVIHTGEKAYKCNECGKAFACKTSLRTHKAIHTGVKPYECKQCGKAFVGQNDLKRHE
                     RIHTGEKPYECNECGKAFSQSSQLQLHKRTHTY"
ORIGIN      
        1 ggtccttcct ggggctgggc agagacagat gagaaggcta ttggaggaca ggcagaagtg
       61 ctactgaaat gcaaatccct gtagatcttg aaatggtctg gccctggctt gaagcttagg
      121 ccgagaaaag tgtatcctca ctgtatcttc agctcatttt aaaccttatg gaggtgctca
      181 agtcactcaa actactggcc aatcagaatc ttcactggac ctgccaatca gaagagaagg
      241 cggccttttc cagggtacct tgttgcagga ttcgcttagt agctaagcct acttaaatgg
      301 tcctggctgc tgtgctctgt gtcctgcggt tggattctgt taggcatgct caggcaagct
      361 tcaaagttgc gacatggatg tattgaccta tgatgatgta catgtgaact tcactcgaga
      421 agaatgggct ttgctggatc cttcacagaa gagtctctac aaagatgtga tgcaggagac
      481 ctacaggaac ctcactgcta taggttacaa ttgggaagac catactattg aagaacattg
      541 tcaaagtttc agaagacatg gaaggcatga aagatgtcat actggagaga aaccctctga
      601 aaatactcag tgtggtaaag cctttgcaca acatagtcat ctccaaagac ataaaagcac
      661 acatactgga gagaaactct atgaatgtaa gccacatgat aaagccttta catacgattc
      721 tcagcttcaa actcttgaaa gaattcatac tggagaaaaa ccctacaaat gcagtcaatg
      781 tggtaaagcc tttgaacgtc attgtaatct tggaaggcat aaactaatac atactggaag
      841 aaaatccaac aaatacaatc agtgtggtaa agcctttgcc ctacagagtc atctcaaaac
      901 gcatggaata acacatactg gagagaaacc ttacaaatgt gatcaatgtg gtaaagcctt
      961 tgcatatcat agttctctcc atgtacataa aagaatacat actggagaga agccctatgt
     1021 atgtgaccaa tgtggtaaag cctttgcaca actcagtcat ctccaagttc atggaataac
     1081 acatactgga gagaaacctt acaagtgtga tcaatgtggc aaagcctttg cacatcatag
     1141 ttatctccaa gtacataaaa gaatacatac tggagagaag ctctgtgaat gtgatcaatg
     1201 tggtaaagcc tttttatctc atagttatct ccaagtacat aaaagaatac atactggaga
     1261 gaatctctat gaatgtgatc aatgtggcaa agcctttaca tctcatagtt atctccaagt
     1321 acataaaaga atacatactg gagagaagct ctatgaatgt gatcaatgtg gtaaagcctt
     1381 tgcatctcat agttatctcc aagtacataa aagaatacat actggagaga agccctatgt
     1441 atgtgatcaa tgtggtaaag cctttgctcg actcagttat ctcaaaacgc atggaataac
     1501 acatactgga gagaaacctt acaagtgtga tcaatgtggt aaagcctttg aacatcgttg
     1561 taatcttgga agtcataaat taatacatac tggagagaaa ccttacaaat gtgatcaatg
     1621 tggtaaagcc tttgcatctc atagttatct tcaagtacat aaaagaatac atactggaaa
     1681 gaagctctgt gaatgtgatc aatgtggtaa agcctttgca tctcatagtt atctccaagt
     1741 acataaaaga atacatactg gagagaagct ctatgaatgt gatcaatgtg gtaaagcctt
     1801 tacatctcat agttatctcc aagtacataa aagaatacat accggagaga atctctatga
     1861 atgtgatcag tgtagtaaag cctttacatc tcatagttat ctccaagtac ataaaagaat
     1921 acacactgga gagaagccct atgtatgtga ttggtgtggt aaagcctttg catatcatag
     1981 ttatctccaa gtacataaaa gaatacatac tggagagaag ccctatgtgt gtggtcaatg
     2041 tggtaaagac tttgtagttc cgagtgagct taagagacat aaaagaacac atactggaga
     2101 gaaaccttac aaatgtaatg aatgtgataa ggcctttgta ggtcagaatg atcttaaaaa
     2161 acataaaaga acacatactg gagagaaacc ttacaaatgt aatgaatgtg gtaaagcctt
     2221 tgtattcaat tttaatctcc gagcacataa agtaatacat actggagaga aagcttacaa
     2281 atgtaatgaa tgtggtaaag cctttgcatg taaaactagt ctccgaacac ataaagcaat
     2341 acatactgga gtgaaacctt atgaatgtaa gcaatgtggt aaagcctttg tcggtcagaa
     2401 tgaccttaaa aggcatgaaa gaattcatac tggagagaaa ccttacgaat gtaatgaatg
     2461 tggtaaagcc ttttcacaat caagccaact ccaactacat aaaagaacac atacatacta
     2521 aagagtaacc ctatgaatgt aaccaatgta gtaaagcctt tactgtgata ttcaaaggca
     2581 tggtggttaa aatatacttg gcccatggca agtggcagtg ttaggaggta tggccttttt
     2641 ggagtagatg tggcctttga ggatgtatgt cactggcggc gggggggggg gggggctttg
     2701 agaccccatg cataaactct acccagggca gaagagtctt ctggctgcct tctgatcaag
     2761 atgtagaact ctctccagca tcatgtctgc cctgacatga cactgagatt ccttccacct
     2821 tgataataga ctgaacctct gaatctgtat accctccccc caattaaatg tcctttctaa
     2881 ga
//
