LOCUS       XM_039087214             357 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus up-regulated during skeletal muscle
            growth protein 5 pseudogene (LOC103693330), mRNA.
ACCESSION   XM_039087214
VERSION     XM_039087214.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087214.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..357
                     /gene="LOC103693330"
                     /note="up-regulated during skeletal muscle growth protein
                     5 pseudogene; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 ESTs, 4 long SRA reads, 9
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:103693330"
                     /db_xref="RGD:9281539"
     CDS             76..252
                     /gene="LOC103693330"
                     /codon_start=1
                     /product="ATP synthase membrane subunit DAPIT,
                     mitochondrial-like"
                     /protein_id="XP_038943142.1"
                     /db_xref="GeneID:103693330"
                     /db_xref="RGD:9281539"
                     /translation="MAGPESDGQFQFTGIKKYFNSYTLTGRMNCVLATYGGIALLVLY
                     FKLRPKKTAAVKAT"
ORIGIN      
        1 ggccgagcta gtggctgggt ttgttgaagg acatcggctg cagagtttgt gattcggacg
       61 aagaagattg aagtcatggc tggtccagaa agtgatggcc aattccagtt cactggtatt
      121 aaaaaatatt tcaactctta taccctcaca ggtagaatga attgtgtcct ggccacatat
      181 ggaggcattg ctttgttggt cctatacttt aagttaaggc ctaaaaaaac cgcagctgtg
      241 aaagcaacat aaatggattt tgaaatgtct ggcctcatct gttaagtccc atgcctgaag
      301 aagctgatgt gaactcatca tgtaatactc aatttgtaca ataaattatg aacctgg
//
