LOCUS       XM_039087592           10014 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC103693260
            (LOC103693260), transcript variant X1, mRNA.
ACCESSION   XM_039087592
VERSION     XM_039087592.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10014
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..10014
                     /gene="LOC103693260"
                     /note="uncharacterized LOC103693260; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:103693260"
                     /db_xref="RGD:9438191"
     CDS             3022..6231
                     /gene="LOC103693260"
                     /codon_start=1
                     /product="putative ankyrin repeat domain-containing
                     protein 20A4 isoform X1"
                     /protein_id="XP_038943520.1"
                     /db_xref="GeneID:103693260"
                     /db_xref="RGD:9438191"
                     /translation="MPEDIDFDGQTLNTSEQPHWYWRLWTCCLGYGCLDYQVDEYPVY
                     LIPYEPVGQFQKAASMGDLSTVEHFITSRRYHVDKYDRRNRTSLHYACAHNHPEVVML
                     LIKSNCTINAQDDEGCTPLIKSNFFEQHLQATERNNLECVSILLKHGADPHMADFTGN
                     TALHYAVYNGNRAIASELLKYKVDINAITKHGFTPFSLAVFEKREKMAEFLTERGADV
                     HEVIESNSEETSFKQPEQRSKKHIRFNEEVHYNTGLKPCCSELRPPEQLKSILKKPDQ
                     ISTEVDNNMEEKSLSRLPDKPDPDIPGPTTENNDSISIIKKVSKDPEININNTECISI
                     KTSSRFLHQSKLVRRVENRVRKLLGRHEVNVCSQGEPLPITSEGKTPIKNLSTDSAIE
                     MLDRESVPLRLPPEDNSDDMLLVQKNTQGDNPIQKETPKLVCRLSRKTEVNVTLEEKI
                     LPSTSEGKTYSMYLKERLKERMKEGTENSESDTSDEEPFPSTSAGRTHSMKMTEKKKE
                     HEGKDAYMHSRHSSVKRNEYIKEQADWRHEQLKGLLKNDIKEILMEQLATEQARMRKL
                     LREDVRKTSELLRNELRQMCVEQVALLQAHVTETQQEQDLFRRDLKEVVHEQSKKSII
                     CPKEKPLPGPFKGTADLQRTSLQQKVKKKYGDDHDGFPSHSEESLMQTDEGRQSDSHC
                     MPLNKFIKEELKEAFCEIFERNKYDTSLKKELPHVSKERKQLRKIPKEQQLKNKYDSK
                     SRQPGEQVSAKTAKEVECVHLKEIDKKDFKVKICEVLEQQENNVCPKEEGIHHIFKGK
                     TRVKKVSQEQEMEKEYNVGYASFWSQPSMRTDEATVGEQNLLQHKHLKVHFQKDLKEM
                     VREQFENSEVLLYPKEEKPPDDSRGVRHIKVEEKKTGYLYVPHFSSFEHRLAALRATA
                     HIEPAPAACPGGAGDMGDMDKAQKSELALPLALALQTEHPGGQQQIKPEPVPEYCSDE
                     ITDPDHNVDFALNSCLLAPGKGDRLSTDPESAPLCGPCDMEDPGNDADPDAHAAHSND
                     HFTQSMNTNTRPAPACGRGDTTDHDNGTDLGSALPVVVD"
ORIGIN      
        1 tgttgtctaa ttgcttgtgg acttcaagta gtatattgaa tagccttttc tagtccctga
       61 ttttagtggg attgcttcaa gttgctctcc atttagtttg atgtgggcaa ctggcccaat
      121 ttgggatcaa tctcaagggg aagctcaaag ctctgatact attactcatg ctatggtcta
      181 tttgcacata ggagcctagc atggctgtcc tctgagaggc ccaacaagca gctgactgag
      241 acagactaag atacttacat ccaggactga agttggggac ccctgtcatt gaattaggga
      301 aaggctggaa gaagctgaag gggaggacca gcagtctcaa ctaacgtgga cccctgagat
      361 ctctcagaca ctgagccacc aaccaggcag cacacattag ctactctgac tctcccgaca
      421 atatacaaca gaggactttc tggtttagct tcagtgagag aaaggacagc taacccctga
      481 gagacgtgag gccccaggag tgggtgaagt ttgggggagt ggacacatcc tctcggagat
      541 gggggaggag gaacgggatg aggaacagtt ggataacgga ctgggaggga gaataacagc
      601 tgcattgtaa aagaaataaa agtaataaaa aattgtgcta gatgtatagc taataggaag
      661 agagcagctg cctggggtgc caccaaagca tgaagtccca gaaatactga acacaaaagg
      721 attaataatt agcataaaat actgtggtat accatagaca ccttatctta acacaggaga
      781 tagttaagga aagagcatga aaatactgtg taaagtggac taaatgtagg aaggtgttga
      841 ctacattagt aagaataaaa tcaacattga aaaattagta gtattttatc tctttgtagt
      901 gtaaaaaatt tagtgatatt ggaggacata atgatattca tgtgcaaaat atgattcatt
      961 gtgatagaac tggaagggaa gtttaatgta tagtaagtgc tatttgcaaa tacagatgac
     1021 atatacaagg tttgaggtaa aggatcttcg tctaatctgt acaaatgcaa caaatatacc
     1081 tagggacaaa ataaaacaag ctcaaatttt tcagacaatg tagttccaga cttaaaattt
     1141 cttaagtcat cattacagat atgtcaagaa acaattgaga aagaatatga ctaattgacc
     1201 tttgatcttg agtataaagc aacattttac tcttgtgact agggtggaaa cacccctcta
     1261 gcagctcacc agcaacacta tggacagact cttcagctgt tggttttggc tctttttcag
     1321 ttattgtttc agtatgaaat ataaaagtgc ttttaacatt catataaaaa ctcttttagt
     1381 aagtattctg agttcttatt atgacttccc aatgtacctc actttagaag ttttcacata
     1441 tattaaactt gtgtttcagg agttgattat gatcagtcac tgctttcctt acaacttttt
     1501 gttatgttga agacatcaag agagattaac ccccaattaa agcaacagca ctcaccccca
     1561 ccccccaaca aatacagaca gagaaggggg gtgtggttct tccacatgct ttgttctggt
     1621 ggctgcagta attgatggtg ttttgtttac atgctcatga agttagtatt cctatttcat
     1681 tcatcctcca tgctcctaga gagcaattca accttggctc tgtcttgata gcttgctagc
     1741 atttccttga gactaatatt ctttcccaag tagtggtaaa ctacaaaatt gacccctgcc
     1801 tccaagcatc cctctccagc acattcagaa ttttaaatca ctcatgagta aatactgaaa
     1861 ccatcaactg gatggttttg tgctcaacaa gcatttctgt gtaacactga gtccttataa
     1921 cttacaacct gtgccaaaac tccacaggag aacacttctt tcctttgact cactgtgttc
     1981 ctgactatag ctaagagttt cagactccag gagctgtagt tagtaaactc tgagataaca
     2041 gcttcgtttt cctctcttcc attttttgtc acctctgctg aggatctgat ggagtggact
     2101 ttgaacctcc tcttcagaaa cttgttcagt agtgttttag gatatgagat aaagacagaa
     2161 atataatcta tacactattt ctgcacacta ttgaatgttt attttaattt taattttaat
     2221 ttaaatccat ccctaaagaa agaaaatttt aagggagaat tttagggcag aagtgtcata
     2281 ccctttctat attgtctgtg cttgcaggat tttttttgga cacagctaag agttgaggaa
     2341 tacaaatttt taattaagca ttagaaaaaa atagaaatat cagaacagat ttttgtaaac
     2401 ttagtctttc taggaatcca agcatatcaa atttaaaaag ggtcctcaca ctttaatttt
     2461 agggaataag aatgacatga cagattgact gatgggcaat acctacaaaa tgttaaaaga
     2521 tgccaagaaa agaacacaaa tggtatgaat tacaggttag catcaggaaa agagttcctt
     2581 gcagggctca acctcagggc atcaggaaat gcaataacta ggccttctga gctggtgatc
     2641 atagcagggc tataaaggat ttgaaccatc actcagctcc cctcagcaat tgcctttgaa
     2701 agctagagtg gtagtctact ccagagttaa caattagcag ggctttgcag gtaaactgtg
     2761 caaggtaggt gaggttcctg tcgctggagt ctgaagcaga caagtgtaat acacagttgt
     2821 gagcacatgc actcacgagc agcatgcttc ctcgttgcta ggcaacgaaa agggattctg
     2881 ctcaaactga accactgacc tggtctggct ggatattctt tttgtttttc taagtttttg
     2941 tgtggggctt aggaggaagt agctgacaaa aggggaggga agggacgaca gcacgggcct
     3001 ccgtggccct aggcctctat catgccggag gacatcgatt ttgatggcca gacactgaac
     3061 acctctgagc agccacactg gtattggcgc ctgtggacct gctgcttggg ctatgggtgc
     3121 cttgattacc aagtggatga atatcctgtc tacctcatcc catatgaacc tgtggggcag
     3181 ttccaaaagg cagccagcat gggtgatttg tctacagtag agcacttcat cacctcccga
     3241 agataccatg tggataaata tgacaggagg aacaggactt cactacacta tgcatgtgct
     3301 cataaccatc cagaagtggt gatgctgtta atcaagagca actgcactat taatgcccag
     3361 gacgatgaag gctgcacacc cttgattaag agcaattttt ttgaacaaca cctacaggcc
     3421 acagagcgaa acaacctgga atgtgtttct atattactga agcatggtgc tgatccacac
     3481 atggcagatt ttactggaaa tacagccctc cactatgcag tgtataatgg aaacagagca
     3541 atcgccagtg aactgctcaa gtacaaagta gatattaacg ccataacaaa gcatggcttc
     3601 acaccatttt cccttgctgt atttgaaaaa agagagaaga tggcagagtt tttaacagag
     3661 aggggtgcag atgtacatga agtcattgag tcgaatagtg aagaaacatc tttcaaacag
     3721 ccagaacaaa gaagtaaaaa gcatatcagg ttcaatgaag aagtgcacta caatactggt
     3781 ttgaagcctt gctgcagtga actaagacct ccagaacagc taaaatcaat acttaaaaaa
     3841 cctgaccaga tcagtacaga agtggataac aatatggaag agaagtcttt atccaggctc
     3901 cctgacaaac ctgaccctga tattcctggg cctacaacag agaacaatga cagtatttcc
     3961 attataaaga aagtatctaa agacccagaa attaatataa acaacactga gtgtatctct
     4021 ataaaaactt catcgaggtt tttacatcag agcaagctgg tcagaagagt agagaacaga
     4081 gttcgaaaac ttttaggaag acatgaagtt aatgtttgtt ctcagggaga gccactacct
     4141 attacctctg aaggaaaaac acctataaag aatctatcta cagactcagc aatagagatg
     4201 cttgatagag aatctgtacc tttgagactt cctcctgagg acaacagtga tgatatgttg
     4261 ctggtgcaaa agaatactca gggtgacaac cccatccaaa aggagacacc aaagttggtt
     4321 tgtaggctct ctagaaaaac tgaagtgaat gttactcttg aagaaaagat actacctagt
     4381 acctctgaag gaaaaacata ttctatgtac ctgaaggaaa gattaaagga gaggatgaaa
     4441 gagggtactg aaaactctga atctgatact tctgatgaag aaccgtttcc cagtacctct
     4501 gcaggaagaa cacattcgat gaaaatgaca gagaaaaaga aggaacatga agggaaagat
     4561 gcatacatgc attcaagaca ttcttcagtc aagaggaatg aatacataaa ggagcaagct
     4621 gactggcgcc atgagcaact gaagggactc ctcaagaatg acataaagga aatactgatg
     4681 gagcaattgg ccacagagca ggcaaggatg aggaaactcc ttagagagga tgtgaggaaa
     4741 actagtgagc tactcaggaa tgaattaagg caaatgtgtg ttgaacaggt ggctcttttg
     4801 caagcacacg tgacggagac acagcaggag caggacctct tcagaaggga cttaaaggag
     4861 gtggttcacg aacagagtaa aaagtctatt atttgtccta aagaaaagcc actacctggt
     4921 ccctttaaag gaactgcaga cttacagaga acatctctac aacaaaaagt aaagaaaaaa
     4981 tatggagacg accatgacgg tttcccttca cattcagaag agtccttgat gcaaactgat
     5041 gagggcaggc agagtgattc ccattgtatg cctctaaaca aattcatcaa agaagaatta
     5101 aaagaagcat tttgtgaaat atttgaaaga aataaatacg acacctcttt gaagaaagag
     5161 ctacctcatg tctctaaaga aagaaaacag ctaaggaaaa tacctaagga acaacagcta
     5221 aagaataaat atgacagcaa atcccgacag cctggtgagc aggtttctgc caagacagca
     5281 aaggaagtag agtgtgtaca tcttaaagaa attgataaaa aagatttcaa agtgaaaatt
     5341 tgtgaagttc ttgaacaaca ggaaaacaat gtttgtccta aggaagaagg aatacatcac
     5401 atttttaaag gaaaaacaag agttaagaaa gtatcccaag aacaagaaat ggagaaggag
     5461 tacaatgttg gatatgcatc cttctggtca cagccttcta tgagaacaga tgaggccaca
     5521 gtaggcgagc agaatttact gcagcacaaa catctgaaag tgcacttcca aaaagactta
     5581 aaggagatgg ttcgtgaaca atttgaaaat tctgaagttc ttctttatcc taaggaagag
     5641 aagccacctg atgactctag aggagtaagg cacataaagg ttgaagaaaa gaagacaggg
     5701 tatttatatg taccccattt tagctctttt gagcatagac tcgctgcctt gagagctact
     5761 gcacacatcg aaccagctcc tgctgcctgc cctggtggtg caggtgacat gggtgacatg
     5821 gacaaagctc aaaagtctga actggctctc ccacttgctt tagctcttca aactgagcac
     5881 ccagggggcc aacaacaaat taagcctgag cctgttcctg agtactgttc tgatgagatc
     5941 actgaccctg atcacaatgt tgactttgct cttaactcct gtcttcttgc tccaggcaag
     6001 ggtgacaggc tcagtactga tcctgaatct gctcctcttt gtggcccctg tgacatggag
     6061 gaccctggta atgatgctga cccagatgcc catgctgcac attcaaatga ccacttcacc
     6121 caaagcatga acaccaacac caggcctgct cctgcttgtg gcagaggtga caccactgat
     6181 catgataatg gcacagatct gggatctgcc cttcctgttg ttgttgactg atggttgata
     6241 caccaaatcc tacaagggtg gtctggggga ctctaaccaa gaagctgttt actagtaaga
     6301 aaaatgatga tcagggtaag ctaccataca aacagtggtt taaaatagaa gatgatttct
     6361 gtccttgaaa actaattttt ttggtactaa aacttatgat taataaattc catgcttcat
     6421 atagggtttt ctaaacttta cttggtacca ggaaaaaaaa ttctcttttt gccaataata
     6481 ttgaagatac actatattta aaaaaaagtc agtttaaccc aaaagacctg accaactaat
     6541 gttggttcat ggttgtttcc tattctggaa tgaggaaatt gttttatttt cccatgattt
     6601 ctaagttttc agagtaggta agcacatgca gtgatatata actgttaact atcaatcagt
     6661 atctactttt tctatgctga tatactgact tgcgggaata ccatcatctt gaaaacaaac
     6721 attacaaaac aagcagcatt tgagaaaaca aaaacaaaat gagcctcctt ccacttctca
     6781 taccttctca tgcactgatg ttattaccca agatgctaca gacgatgcca ccgatgatgc
     6841 tgctcatgat cattgtgaga atgctaccaa tgctattcct gatgacacta ctaataattg
     6901 ttttcctctc tagtgctgca gttgattgtc agtcctttga agcatctatc aggacactta
     6961 ctactatact agaaagaatt aaaattcttt taaagaattt ataaaataca aattttaaga
     7021 tataaaattt caaactatct gttggcattg gataaaatga cactatgacc atcctatggt
     7081 atggttaagg ggcaggtttt taatgtagac attgtagctg gaactaccag gaagcatcta
     7141 gagaagactg agcatggtca gtacaaccga tgtggtcatg agagaatccc agcagaacag
     7201 agagatagag gaagggagag aggaacatga actagagaga acaagaaata gcatggctat
     7261 aaggagaatg agaagcccat gagttagagg gagaaatgag aggagctaat gcattagtat
     7321 ggactttaaa gtgggtaaca ggtacctgtg atactgaggg agcttagagg ctagtgcaag
     7381 ctttggtgtg ctcatagaca ccagtccctc cagctggtca taaaagaaag taactccttt
     7441 ggtagagtgg aaccaacttc aaaactccaa agtccagatt aaactcaatt ctggatatca
     7501 cactgccttt tggagttttt gggactgaag tttcctttgg acctaaccag catcaatgga
     7561 ttttactaga ttttgcaagt caaatacagc cttgttcaca tttttatact cagtgtacaa
     7621 acatctatac aaacaccacc caaacagtcg agttgctcat aatacatcaa taaagttaaa
     7681 atgtggttgc ttacctgaaa tttctttact tttaatttta tgataccccc tagcacccat
     7741 attctatgcc ctatagtccc tcactgaggg gtggggcctt atgagcctct cctcataaat
     7801 aacaaaatgg cgatggtcca gttttatggt ggtcttctgt aggtaatcac agatatagtg
     7861 agcattcata aatgtgggcc aatggttgta tactccattt tacagaattc acctgaaact
     7921 tctgcctccc tcctccaaaa cagtccccaa gccttgtaat gtgtgatata gatgtcttgt
     7981 tcaggtctga gcacctgaca gatatgcact tggcctgtta ttggtctgtg catttgacac
     8041 agacaactgc ataaagaaac atctctgatg agggctgatg ccctaatgtg cagttataaa
     8101 catatttaga aagcaacttg acactatgtc attggaggtt ctcttctaga gactaccatg
     8161 tggagtaaac acatcagtgg ttaaatctaa gtcacccata atgcatcagt ctgtagtgtg
     8221 gcagattgtt tctagaaaca tggtatatat ttaacaaata cttcttctta agaagttacc
     8281 tgacactgac tttacaatag taactgtggc ctgaaagtaa agaaaaatat caaagaatcc
     8341 aagagaagag accatatatt actgtaaact tatgattaat aaattccatg cttcatatag
     8401 ggctttctaa actttacctg gtaccagaaa aaaaattctc tttttgccaa taatattgaa
     8461 gatacaccat atttttttta aaaaaggcaa tgctagactg tctcaaaatg tgattagagg
     8521 agtttccctg gcaggaacat gacttagcag agagaaggat ttcacatcaa gtttgatggc
     8581 caaagttgga ccccagaaca tatatggaaa taaagaaatg tccaaactca gtccactgtc
     8641 ctctttatac cccacactca tacagagggc agggggctgt atagaaagac aacaagaggg
     8701 ggcatatttg ggaagtatct aggaggaatg gaatagagac agtcgggtag atatgattaa
     8761 gattcattga ataactgttt atttgtcaaa tgataaacat caagtgaatg aatgaggcta
     8821 aaaagtagtt gcaggcaggc aatagtagtg catgctttta atcccagcaa tctggaggca
     8881 gaggctggca gattgctgtc agtttgaggc cagcctaatc tatagagtaa gttttaggat
     8941 agtctgggtt acacagagaa accctgtctt aaaaacacaa aaagaaaaat gagagaacat
     9001 tctcatggtc aatgttaatt gccagaaaat gctataacac acagcttcct tcagtagtgt
     9061 tttgtgtagc ctcatgctgc tgcaaaatca aaacaaagac taacatatct tttcatcaac
     9121 atctcagtta ctagaacatt gcttcaaaag ttaaacattt catcatatta acattatatt
     9181 atatgtgcaa tagcatttta aaaagtgcga caactcacat tccagctggt gccttctgtc
     9241 tgggcagatc atcagtttgt ctgctcctct gaagacccca tagtctgaag gcatcccagg
     9301 aggtctgcca gggcaacagc taaggcaccc ttccaaataa ctgcagcagc tggaaacccc
     9361 aaggaatcca gcagaattgg gacacatctc cagccccacc ctttgcatgg gcctttgcct
     9421 cctgctgggg aagatcaaca gcttgtctgc tcctctcaag actctataac ctgaaggcct
     9481 cccaggaagt ctgctatagc caatgccacg ggtctcccag gagacctgca gtaacccaag
     9541 aacacagcaa cacaggaggc aaactccaga cagagccact caggcccgtt aacaccagag
     9601 ataaccagat ggtaagaggc aagcacaaga tcataagcaa cagaaatcaa tatactttgg
     9661 caccatcaga acctagttct ctcaatacag caagccatgg atacaccaac acacctgaat
     9721 gtcagatact attttatgtc aggaagataa gagtccttta agaaggatat acttagctca
     9781 ctgaaagaaa tacaggaaga cacaaacagg tggaaaaatt aaacaaaatg gtccaagacc
     9841 taaaaatgga agtagaaaca ctaaagaata cacaaacagt ggcaaccctg gaaatgaaaa
     9901 accaaggaaa gaggtcagga actacagata caagcatcaa caagagaata caagagatag
     9961 aagagagaat ctcaagcata gaagatacct tagaagatac tgacacagca gtca
//
