LOCUS       XM_039082432            1519 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC103693111
            (LOC103693111), transcript variant X1, mRNA.
ACCESSION   XM_039082432
VERSION     XM_039082432.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082432.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1519
                     /gene="LOC103693111"
                     /note="uncharacterized LOC103693111; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 32 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:103693111"
                     /db_xref="RGD:9097864"
     CDS             153..944
                     /gene="LOC103693111"
                     /codon_start=1
                     /product="uncharacterized protein LOC103693111 isoform X1"
                     /protein_id="XP_038938360.1"
                     /db_xref="GeneID:103693111"
                     /db_xref="RGD:9097864"
                     /translation="MATDVRAEFCLPHPHPEGGGPAVGSLSVLGFSEVKGRGLGSHLL
                     LPAGKRQPLVWQVVYLWGGENRRSYWCRRSQGTLWSCGYGRRVLGTALRSSGRLSHLS
                     RFHRMLLFPWARVLCLCTLAPVSEDKYYLTELCPGSQPTGMVPPTFRAGLSRIQRLLD
                     SYRQSEVLERMSTSVNLLPYLLMGAECKCLSIRAFSLVVWPSSLLLAREHPSFQIQLV
                     VQTSRISSSVSCPSWPDSLPCDWGHTSPRGTLIFSDGLSHGRGRA"
ORIGIN      
        1 tctctctttc tctctctctc tctctctctg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
       61 tgtgtgtgta aggaggactg ttgaggggaa aaagacacaa atagtcatta tttaagaaag
      121 cagaagccag gcagacaagg acttccccct ccatggccac agatgtcaga gcagagttct
      181 gtctccccca tccccacccc gaaggaggag gtccagctgt agggtctctt tctgtcctcg
      241 ggttttctga ggtgaaggga aggggacttg gaagtcatct cctccttcct gcagggaagc
      301 gacaaccctt agtttggcaa gttgtctacc tatggggcgg ggagaatagg aggtcctact
      361 ggtgcaggag gtcacaaggc accctttgga gctgcggtta tgggagaagg gtgctaggaa
      421 ctgcactcag gtcctctgga agactgagcc atctctctag gttccacaga atgttgctat
      481 ttccttgggc cagagtgctc tgtctctgca ctctagctcc agtatctgaa gacaaatatt
      541 acctcacaga gctgtgccca gggtcccagc ccacaggaat ggtgccgccc acattcagag
      601 cggggctttc tagaatccag agactccttg acagctatcg ccagagtgag gtcttggaaa
      661 ggatgtcaac cagtgtgaac ctgcttcctt atctgctaat gggggccgag tgcaagtgcc
      721 taagcatccg ggccttttct ctggttgtct ggccctcctc cctcctcttg gccagggagc
      781 atccatcctt ccagatccaa ctggtggtgc agacctccag gatatcttcc tctgtcagct
      841 gcccaagttg gccagacagc ttaccctgtg actggggtca cacgtcaccc aggggaacgc
      901 ttattttttc tgatggactc agccatggaa ggggaagggc ctaaaataaa tgcagagact
      961 tagaggagac cagagtgcaa cagggccagc acagacttca agagtaattt atagatgctc
     1021 cttaggctga agcaattcgc tcgagcagtt agggcccggc caggccctcg ggctctgcag
     1081 gcctttctgt actctgcagt tgcttggaca aagaaagagc tgttctgagg acagcctctt
     1141 ttatttactt attctctcca tgtgtgcatg tacacaaacc tatgtgtgct gtagcatccc
     1201 tgtgagggtc agaggacaac ttgtagtttt tatctgctga gccatcttgc cagtgcagcc
     1261 tcctggtgtt ttcttttgtt tgttttgttt gctttctttc tttctttctc cccccacttt
     1321 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgttg ttttgtagct
     1381 ctggctggca tggaaactac ccacctgtct ttgcatccca agctgagggt aggaatgtgt
     1441 gccaccatgc ccagcctctg ttttgttatt ttaactgaga caaaattgac atacaataaa
     1501 atgtacatat ccaaaaaaa
//
