LOCUS       XM_039080051            1539 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus nuclear transport factor 2 pseudogene
            (LOC103692782), mRNA.
ACCESSION   XM_039080051
VERSION     XM_039080051.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1539
                     /gene="LOC103692782"
                     /note="nuclear transport factor 2 pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:103692782"
                     /db_xref="RGD:9216279"
     CDS             234..614
                     /gene="LOC103692782"
                     /codon_start=1
                     /product="nuclear transport factor 2-like"
                     /protein_id="XP_038935979.1"
                     /db_xref="GeneID:103692782"
                     /db_xref="RGD:9216279"
                     /translation="MGDKPTWEQIGSSFIQHYYQFDNDRTQLGAIYIDASCLTWEGQQ
                     FQGKAAIVEKLSSLPFQKIQPSITAQDHQPTSDSCIISMVVGQLKADEDAIMGFHQMF
                     LLQNINDAWVCTNDMFRLALNNFS"
ORIGIN      
        1 gagaaggatt ccaattttca gagctatctg gacgtattgt gttcctggtc ttcccaggga
       61 acctgggttt ccctttgggg gattttacct tgttaatggt agaatttaac aagtgagccc
      121 agaagaaatc tcaaggacta tgtactaaag tttgagtgag gaccgcgctg ggttgccgcc
      181 gccgccgcca tcttgccagc cccacaggtc tcagtgaggt gagtgactcc aggatgggag
      241 acaagccaac ttgggagcag attggatcca gctttattca gcattactat caatttgata
      301 acgacagaac ccaactaggt gcaatttaca ttgatgcgtc atgccttacc tgggaaggac
      361 agcaattcca aggcaaagct gccattgtgg agaagctatc tagccttccg ttccagaaaa
      421 ttcagcctag catcacggcg caggaccatc agcctacatc agatagctgc atcatcagca
      481 tggttgtagg ccagctcaag gctgatgaag atgccatcat gggtttccac cagatgtttc
      541 tattacagaa catcaacgat gcttgggttt gcaccaatga catgttcagg cttgccctga
      601 acaacttcag ctgacctcct cctggccaga tagtcacgct gtttcctcct ccctctgccc
      661 aatcctatct cctccagatg ctccaaacat catacacaaa ggagcggggc cgaggtggga
      721 gtgggcgcag tgctcgtctg tcaccacggt attgtgcatg atgttgggat gctagacagc
      781 tgcatctgac aggaaaagtt ggtgttgtac aagcgcatgc cttggaaaga cttaagtaat
      841 gcaaaagatt gtcagttttt ggttttgttt tcttttgttg ttttgttttc atctactgac
      901 aagttgctct agtaacccaa agaagtgaag gagaaagcag ctgcctaaag atatggattt
      961 gttcagatgt ttcaatgcct cgtgatacaa taaaaccaca aaaattaaaa aaaaaaaaca
     1021 aaaacaaaaa gtttgagtga aaagcaatat accaggcaag ctataggtct tgggggctgc
     1081 ctgaagaaat gtgtctacta gtgtttcctc tgactccttc tcccaccccc accccccttt
     1141 ttttcagagc aagcagctgt caattggtag cttcttagta taacagggcc ccagaccttg
     1201 gcattactga ctccctgatg gaagagtgat cggggctgtg aaactcagca cttagacagc
     1261 accacttggt aaaataaaaa caaagacctg atccatcaaa gtccatatag ttgagaagtc
     1321 tcaaaatgtg ctaatcttgc tttttgggct cctgtactta tgtttctggc taactgttct
     1381 tgttcagtga agtacgtcaa accagaacat gggttttctt tttttggggg gtggggggca
     1441 cttaaaagct catcctggga aaggctcagg attacactgg agtcctgagc tcccagtgta
     1501 gccaccaaga gactaataaa gactttctag tattttaaa
//
