LOCUS       XM_039113212             566 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transcription elongation factor B
            polypeptide 1 pseudogene (LOC103692640), mRNA.
ACCESSION   XM_039113212
VERSION     XM_039113212.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..566
                     /gene="LOC103692640"
                     /note="transcription elongation factor B polypeptide 1
                     pseudogene; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 20 Proteins, and 98% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:103692640"
                     /db_xref="RGD:9258221"
     CDS             1..342
                     /gene="LOC103692640"
                     /codon_start=1
                     /product="elongin-C-like"
                     /protein_id="XP_038969140.1"
                     /db_xref="GeneID:103692640"
                     /db_xref="RGD:9258221"
                     /translation="MDGEKQTYGGCEGPDGMYVKLISSDGHEFIVKREHALTSGTIKA
                     MLCDPGQFMENETTEVSFREIPSHALSKACTYFTYKAHYTNSSTEIPEFPIAPEIALE
                     LLMATNFLDCQ"
ORIGIN      
        1 atggatggcg agaaacaaac ctatggtggc tgtgaaggcc ctgatggcat gtatgtgaaa
       61 ttaatatctt ctgatggtca tgaatttatt gtaaagagag aacatgcatt aacatcagga
      121 acaataaagg ccatgttgtg tgatccaggt cagtttatgg agaatgaaac cactgaggtc
      181 agttttagag agatcccttc acatgcgcta tccaaagcat gcacgtattt tacctacaag
      241 gcccactata ctaacagctc cactgaaatt cccgaattcc caattgcacc tgaaattgcc
      301 ctggaactgc tgatggccac aaacttccta gattgtcaat aaaatagatt ataaattata
      361 gtaaactcaa tccctgtagt tcagttagta attgttcaca tatggcatgt tgcctgtatg
      421 aagctgaact ctaaagttag ttgttgagca gattccttct gtcatttgca tagcagagtt
      481 gaaatttgtt tgctacatca acaaattaag gaagtttcgc aaaccaaaaa ataaataaat
      541 aatgccagtt taaaaaacaa aaaaaa
//
