LOCUS       XM_039091415            4172 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC103692282
            (LOC103692282), transcript variant X1, mRNA.
ACCESSION   XM_039091415
VERSION     XM_039091415.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4172
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4172
                     /gene="LOC103692282"
                     /note="uncharacterized LOC103692282; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 4 ESTs, 12 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     29 samples with support for all annotated introns"
                     /db_xref="GeneID:103692282"
                     /db_xref="RGD:9330179"
     CDS             537..1721
                     /gene="LOC103692282"
                     /codon_start=1
                     /product="natural killer cell receptor 2B4 isoform X1"
                     /protein_id="XP_038947343.1"
                     /db_xref="GeneID:103692282"
                     /db_xref="RGD:9330179"
                     /translation="MLQQTVLLSLFLLLRAHQGQGCAGSSEEVLGVSGKPVRLRPSNI
                     QTKHVSIEWKKKTGHQQTSHIVTWNTLDPESPVVCCSDIYGFESENFALSIKSAKLND
                     SGHYLLEITDQGGIVCTKNFQILIFDPVETPHLTVQGSLWANGTCQLSLSCFVPKDDN
                     VSYALYRGSMLISNQRNGTHWENWTDASSLHTYTCNVSNKASWANHTLTSPQSCQSVP
                     SKFNYLPFVVSIGILVTFLLGAIACFCVWNRKRKQSQSIAKESLTIYEYVKNAQVSRD
                     QQGHFRASGSSSDVRGDEREQRESDRRLFQEQMAEQKSPEDGGAMYSKVQCKPSASTS
                     QEKCTIYSVVEPSRKSGSKKRNQNPSLNCTVYEEIGKQWVKPQNPARLSRRELENFEA
                     YF"
ORIGIN      
        1 ctgattagaa tatttctgag caaatctcaa ttttatgtct cttccttaat cgccccatac
       61 cactcttccc tttcaacatt agctcccact tcctcagggt ccttcttctc agcccaccct
      121 acccccaagt tctttcaaat ttctgtttcc acggtgcgtg ttggtaaggg gccgtcttga
      181 ataatcgcca gtggtttttc tccacactgc tggtgccact gaggattcag caccaggctg
      241 aggaggacca agggctgaga ttttgcagct ggttttgtga gtcactatgc actctgagag
      301 agcacccacc cactggaggc agcttagctt gtgggaaccc aactggaggg actgaggctt
      361 tctcagtggc cttgtcagtg tgcacagcag aagtgaacag ccttgagttg aggaaattgt
      421 ggctggacag gcagggaggt agttctgctg tgtcctgctg gctgttagct gcagagtcta
      481 gacatcagag cacctggagg agacaggggc cccttagcct gctctgttct gtggggatgt
      541 tgcagcaaac tgtcctgttg tcactcttcc tgctcctcag agctcatcag ggccaaggtt
      601 gtgcaggttc ttctgaagaa gtgcttggtg tctcaggaaa gcctgtccgg ctgcggcctt
      661 ccaacataca aacaaaacat gtttctattg aatggaagaa gaagacagga catcaacaaa
      721 cttcccacat cgtgacttgg aacactttgg atcccgaaag cccagttgtg tgttgtagtg
      781 atatctatgg ttttgagtct gagaattttg ctcttagtat caagtcagct aagctaaatg
      841 acagtggtca ctacctgctg gagatcaccg accaaggagg aatagtgtgc actaaaaact
      901 tccagattct tatatttgat cctgttgaga cacctcacct gactgtccag gggtcgctct
      961 gggctaacgg gacttgtcaa ctgtctttgt cctgctttgt gcccaaggat gacaatgtga
     1021 gctatgcttt gtacagaggg agcatgctga tctcgaatca aaggaatggc acccactggg
     1081 agaactggac tgatgccagc agcctgcaca catatacctg caatgttagc aacaaggcca
     1141 gctgggcaaa ccacaccctg acctccccgc agagctgtca gagtgtccct tcgaaattca
     1201 attatctgcc ctttgtggta tccatcggta tcctcgttac ctttcttctt ggggccatcg
     1261 cttgcttctg tgtgtggaat aggaagagaa agcagtcaca gtccatcgct aaggaatctt
     1321 tgaccatata tgaatacgtc aagaacgcac aagtcagcag ggaccaacaa ggacatttta
     1381 gggcctctgg atcttcctca gatgttcggg gagatgagag ggaacaaaga gaatcggaca
     1441 gacgtctttt ccaggagcag atggcagagc agaaatcccc tgaagatgga ggcgccatgt
     1501 actctaaggt ccagtgtaag ccttctgctt ccacatcaca agaaaaatgt acaatatatt
     1561 cagtagttga accttccagg aagtctggat ccaagaagag gaaccagaac ccttccttaa
     1621 attgcaccgt gtatgaagag attggaaagc aatgggtcaa acctcagaac cctgccaggc
     1681 tgagccgcag agagctggag aacttcgaag cttatttcta gctgttggaa gtggtctcat
     1741 cctgtgttac acatcagcat tgactttgga agggagagca tcaaatgatg atgaatctgt
     1801 ctgtgtctgt ggaccagctt ctaggctgga gaggatgccg ttaattcgtg gttttatttt
     1861 attatttttc tttttagata ggatctgaca tagctcagca tgacctgaat ttgctaagta
     1921 gccaaggacg accttaaact tttgatcctt ctgcctatgc ttcccaagtt ttggaatcac
     1981 aggcatgtac cactgtagat ggcttggaaa caatttctaa tagccactgt atgatcaagt
     2041 ttgttaaaaa aaagtccccc aaacttatag atcagatagg aatgggtaga gaggttgtat
     2101 tggccacatt ctgagccgtt ataacctatg atttatgttt tattttattt tattatcaat
     2161 tgtataattt aaaattatac accactgtat aaatgtgaag tagatttctt tttgtggttc
     2221 tcaaaaatga tatccaccac caccccacca cccccaatac cattatggga tgcctatatt
     2281 ctagactctt cccctgccca ccttccaaag caaggacaag gagagagaca gtgactcaga
     2341 ggaaaaggaa gcacaggtcc tctctgaggc tgtgctgtct ggctgtgagc tggctggcag
     2401 ttctcccacg gaggctggaa tcttgtctcc tctccagggt ggggaacccc tgatcagccc
     2461 acatctttgc ttttggccag ttgttcacaa gggagagtgc aaagaaatga gattagatgg
     2521 tgcagttcaa acaggtctct ggacacaaga atcacccaat atggacgtca tcccgataac
     2581 aggtggttaa gaccagtgtg gcccacagta ggacggttgg cttacaaagt cccatcacag
     2641 aaatctacct tgtcattgac ttctttgtgt ttatctttat cttctttagg acagtttttc
     2701 actgtatagt tctggatagt ctgaaactca ctatgtagac cagactggcc tagagcttac
     2761 agagatccac ccacttgtgc cttccaagtg ccagcgtgtt atgctgccac acccagccga
     2821 ttttgtctcc tttgcagaag tctctcagaa accatagcta tccaaaccta gaaccccgag
     2881 gagtgctccc agtgatacat caggagaaag ggctcgcacc atagctatcc aagttcagag
     2941 tcctgagaag tgctccccat gatatacccc gaagggagga ctcaaatagt cgattgctga
     3001 agacaaggca gttgagtact gcacaccatg ctagattttt tcaggctagc tccttcagca
     3061 gtgcaggagg agcaggccca acactctgga tgagctcctg aaggcaggaa gtaaaaactg
     3121 agagaggact cattccaatg ctctggattt tttttttttt ttttggaagt cagggtctca
     3181 ctatactgac ctggctgtcc tgaacctcac tgtgtaaacc atgtggactt caaactcaca
     3241 gagatcctcc tgcctctgct ggagtgaaag gcaaatggca ccattcccgg ctcagagtct
     3301 tagtcttgct cttcaagagt cttaccctgc atttatcatg ggaggcacga aaacttgttc
     3361 tcgcccagag gtagtgccag tcctttgcct ggattaaact gatgaaattc tctatattca
     3421 gtgtgtatgg gccattggtt aacattcatt agcatgactg tttaaattct gctagaagtg
     3481 gagctgtctt tctggccaga tgtcagtctt gttcatatac agatagcgga gagccagaag
     3541 accaggctac tctgcctcac gaggacagtc aaaccatagg cttgcttgtg cttcacctga
     3601 tccctcatcc ctgtacgagc ctagcaggct ggcatcccct taggtagaaa cacacagcac
     3661 atcttaaagc cagtgcgaag aaatgggatt attcaaaaag agtctgtggt cttgaggcag
     3721 atattgggag ttgagtcaag gtgtttggta agcagagaca ataagaaatg atggagaagc
     3781 ggggtaagcc ttcaatccca gcattcagga ggcagaggca ggtggacctt tgtgagttag
     3841 aggccagcct aggctataga atgagttcca gaacagccaa gattgcacag agaaacccgg
     3901 tctcaacccc ccacccccag aacaataaaa tgatgaagag atggtgcagt ggttaagagc
     3961 acttgctgct cttccagaag acccaggttc agctccttgt acctatatca gatgcttaca
     4021 acaacctata tattccagga cctccagatt caacgctaac ctcttctatc aaatgaccaa
     4081 taaaagacac atccacaggg tcagggtgcc gatgcaaaca catctggatc ctcacagcac
     4141 cacctgattg tgaataaaag gcattcagta aa
//
