LOCUS       XM_039108845             282 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transcription elongation factor B
            polypeptide 1 pseudogene (LOC103692229), mRNA.
ACCESSION   XM_039108845
VERSION     XM_039108845.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..282
                     /gene="LOC103692229"
                     /note="transcription elongation factor B polypeptide 1
                     pseudogene; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 25 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:103692229"
                     /db_xref="RGD:9100480"
     CDS             19..282
                     /gene="LOC103692229"
                     /codon_start=1
                     /product="elongin-C-like"
                     /protein_id="XP_038964773.1"
                     /db_xref="GeneID:103692229"
                     /db_xref="RGD:9100480"
                     /translation="MCVKLVSSDGHEFIVKREHALTSGTIKAVLSGPGQFVENETDEV
                     NFREMASHGLSKACMYFTYKVRYTNSSTEIPEFPIAPETDWNC"
ORIGIN      
        1 tgtgaaggcc ctgatgccat gtgtgtgaaa ttagtatctt ctgatggtca tgaatttatt
       61 gtaaaaagag aacatgcatt aacatcagga acaataaagg ccgtgttgag tggcccaggt
      121 cagtttgtgg agaatgaaac cgatgaggtc aattttagag agatggcttc ccatgggcta
      181 tccaaagcgt gcatgtattt tacctacaag gtccgctata ctaacagctc cactgaaatt
      241 cctgaattcc caattgcacc tgaaactgac tggaactgct ga
//
