LOCUS       XM_008762609             456 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus phosphorylated CTD interacting factor
            1 like 1 (Pcif1l1), mRNA.
ACCESSION   XM_008762609
VERSION     XM_008762609.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086021) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..456
                     /gene="Pcif1l1"
                     /note="phosphorylated CTD interacting factor 1 like 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:103691999"
                     /db_xref="RGD:9275514"
     CDS             1..456
                     /gene="Pcif1l1"
                     /codon_start=1
                     /product="putative uncharacterized protein FLJ40606"
                     /protein_id="XP_008760831.1"
                     /db_xref="GeneID:103691999"
                     /db_xref="RGD:9275514"
                     /translation="MAATKETGRAAAPSGKRRRGLRHPASDSQTLARLAAGPWLPGVL
                     TCSKRTRGDAATRSARPPVLPPPPRPPQRRCRHLVSRAGTLRCACVGTASEGPRHGRA
                     AILSVAMLAGSPDRDCFLPPPPQLPIFRSFSVSLVVLKRRKSSFALLEM"
ORIGIN      
        1 atggcggcga cgaaggagac cgggcgagcg gcagccccga gcgggaagcg ccggaggggc
       61 ctccgccatc ctgcttcgga ctcccagacc ctggcgcggc tcgcagcagg accatggctt
      121 cctggggttc ttacctgctc gaagcggact cgaggggatg cggccacacg ttctgctcga
      181 ccgcccgttt tgccgcctcc gcctcgccct ccccagcgcc gctgccgcca tcttgtgtcc
      241 cgggccggga ctctgcgctg cgcatgcgtt ggtaccgcct ctgaaggacc tcgccacggc
      301 cgcgccgcca tcttgagtgt ggcaatgttg gctggttccc cagaccgtga ttgctttctc
      361 cctccccctc cccaactccc cattttccgg tccttctctg tgtcccttgt ggtcctcaag
      421 aggaggaaaa gcagctttgc tcttcttgaa atgtag
//
