LOCUS       XM_039106807            2708 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus delta like canonical Notch ligand 4
            like 1 (Dll4l1), transcript variant X1, mRNA.
ACCESSION   XM_039106807
VERSION     XM_039106807.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086021) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2708
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2708
                     /gene="Dll4l1"
                     /note="delta like canonical Notch ligand 4 like 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 ESTs, 4 long SRA reads"
                     /db_xref="GeneID:103691871"
                     /db_xref="RGD:9076375"
     CDS             697..1410
                     /gene="Dll4l1"
                     /codon_start=1
                     /product="uncharacterized protein Dll4l1 isoform X1"
                     /protein_id="XP_038962735.1"
                     /db_xref="GeneID:103691871"
                     /db_xref="RGD:9076375"
                     /translation="MPRPLVATVPAPTGGGLRPRRSPCQPASRAQVPAPLPTSGLPAL
                     RVPGDQPLEIVCLKAETLATRGRLLPRWPPAYVCLPTTRPQHRREAIGRVNLSVAIPS
                     KAKGQASKTLVFSAPGMSPNWPQVTGGFGPPSQLEAYERSPGPPEQLRDLQRGVISPL
                     ARYPSQGTAIWTWHTAPGQYEDNPRPPWGRGTNEFQRQRKRPTDRQTPQGRGKRSRLE
                     EGKEQREKSQGFRAFFVGL"
     polyA_site      2708
                     /gene="Dll4l1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gagaaagagc ccttggggct ctccggggag cgcttaggaa aggggctctg tgtccggttc
       61 tcccttctgt ttccttcagt gcatttaggc tgtgcttacc ggccaggtaa aattgaaggg
      121 caattgaaga gggttacgac cactgccgct attcttgtcc ctgatgacga aggagttggt
      181 gcccaatacc ggcgtggaga cattgccaaa ggtgcagggt ccctcggaga aggttgcctg
      241 gtaatgctta aggcagattc ggaagaaagt ccggcagccg ggctcgcagg gccgcccatt
      301 ggccagcata ccgcgctcgt tggcgaactc ctgcagccgc aactggaaga tgccggagcc
      361 cgccgcgcgc tgctgcacag ggacggagag aaggagggag gagggcggtc aggctcagct
      421 ggcgccggga cacaagcccg gagcgctgcg ggagggggcg gagaggacgc gggacattac
      481 ctgcggccac aggaccgcca gcagcagtag cgcccagcga caggcgctcc gggacccagg
      541 cgtcatccct tggggtgtcc tctccactcg ggggctctga atctgcttgt tgggatgtcg
      601 ctctcctgca agtccgtctg ccaaccgagt tcctgaaaag ctgattcctc tcgggacgct
      661 gctccctcgt cgctttctcg aaaactccgc tgctcgatgc ctcggcctct agtggctaca
      721 gtcccagcac ccaccggagg gggcctccgc ccccgccgct ccccctgtca gccagccagt
      781 agggcgcagg tccccgcccc tcttccaact tctgggctcc cagctctgcg cgtgcccggc
      841 gaccagccct tagagatcgt ctgcttaaag gctgagaccc tcgccaccag aggtaggctc
      901 ttgcctcgct ggcctccagc ctatgtgtgc ctacccacta cgcgtcccca acaccgcagg
      961 gaagccatcg gacgcgttaa cctttccgtg gccattccaa gcaaggcaaa gggccaagcg
     1021 tctaagactc tggtcttctc tgcacctggc atgtccccaa actggccaca ggttactggt
     1081 ggcttcgggc ctccttccca gctggaagcc tacgagcgct ccccagggcc accagagcag
     1141 ctccgagacc tccagcgcgg tgttatctct cctctcgccc gctacccttc ccaggggaca
     1201 gcgatctgga cctggcacac agcacccggg caatatgaag acaacccgag gccaccttgg
     1261 gggcggggca caaatgaatt tcagaggcag aggaaaaggc cgacagacag acaaactcct
     1321 cagggaagag gcaagaggag cagattggag gaggggaaag agcagagaga gaaaagtcaa
     1381 ggtttcaggg ccttttttgt aggcctgtga taaggttctt gcctgaacaa cccggagaat
     1441 agctgcctag actttgacct tctagaggat accttctcac cgagacaacc ctactgctga
     1501 tgttggtctt tcagaactgt gatctgcaga aaggaagagg tgtcaccttt ggatgatcta
     1561 attagtgagg gtgccggcca cccagagggg cccagctttt ctcatgcctc tacgaaagcc
     1621 cacctcctgg gttcactgtc cactggctga ttgctcatgc ctgatgaccc aacatatgtt
     1681 atataaaggg tgcccaagtg ggcaggatta ctgggcatgg tagagtgctg cttgggtttc
     1741 tcctaaggcc aggaaggtct cccatctcct cttccagggt cccaggcacc tagggcctgg
     1801 aatagtttca tagtttcctt ggccttccca gagcgcatgg agcctggaac tgaggggagt
     1861 tttctttctc attaagagca tctagagcgg ggttggggat ttagctcagt ggtagagcac
     1921 ttgcctagca cacgcaaggc cctgagttct gtccccagct ccgaaaaaaa aaagaaaaga
     1981 aaagaaaaaa aaaaaaagag catctagagc ctgcagagac agtaggcctg agaggagaag
     2041 ccaaggattc cagaagcttg tttttgactg tgtgtactga gtaggaagct ttcttatggc
     2101 ctcttcggtg ctggttaaaa ggaaagaagg tggaacgggc acagacttgg cagaactgag
     2161 gtaaacctgg tagcaaaggc caacttgacg acgtcccccc agctgcctca gccacatctg
     2221 ccaaacccag gagatgcctg gaaagccagg tccaggaaca acacagccag cgggtatttc
     2281 cagccagagg ggaggctggg gcttaaggca acttccatgg cattttgccc agagccctgg
     2341 tttccccttc cccagttcct tcctgtccat actctaccaa tgagcaggga ggcatgggac
     2401 aggaggggaa ggctcagggc tacctcactg agggaccacg ggcttaacca gaagtagtgt
     2461 aaccccagca catggaggca gaagaagaag gattaggagt tcaaggccat ccttaattgc
     2521 ataacacttt caagttttct ggaggaccct aatgtgtttg ccagggccca tgttaggaag
     2581 cttgcaattg tctataactc cagatccagg atatctgact cccttttcta actccctcag
     2641 ggatctacac atggcacaca cacagaaaca cttgaaaaat caaaataaaa ttgggaggta
     2701 gaagcaaa
//
