LOCUS       XM_039103330             784 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus late cornified envelope 1F like 1
            (Lce1fl1), mRNA.
ACCESSION   XM_039103330
VERSION     XM_039103330.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086020) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..784
                     /gene="Lce1fl1"
                     /note="late cornified envelope 1F like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, 2 long SRA reads"
                     /db_xref="GeneID:103691629"
                     /db_xref="RGD:9269374"
     CDS             12..371
                     /gene="Lce1fl1"
                     /codon_start=1
                     /product="late cornified envelope protein 1C-like"
                     /protein_id="XP_038959258.1"
                     /db_xref="GeneID:103691629"
                     /db_xref="RGD:9269374"
                     /translation="MSCQQSQQQCQPPAKCPPKCQTPKCPPKCPPKCPPKCPPVSSCC
                     SLGSGGCCSSGSCCGSSSGGCCSTGGGGCCLSHHRRRRSLSRHRHSSGCCSSGGSSDC
                     CGSSGCCGSSQQSGDCC"
     polyA_site      784
                     /gene="Lce1fl1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccacagctga gatgtcttgc cagcagagcc agcagcagtg ccagccccct gccaagtgcc
       61 ctcccaagtg ccagactcca aagtgtcctc caaaatgtcc cccaaaatgt cctcccaagt
      121 gtccccctgt gtcttcctgc tgtagcctgg gttctggggg ctgctgcagt tctggtagct
      181 gctgtggctc cagctctggt ggctgctgca gcactggggg aggaggctgc tgcctgagtc
      241 accacagacg tcgcagatct ctcagtcgcc atcgccacag ctctggatgc tgtagcagtg
      301 gtggcagcag tgactgctgt ggcagcagtg gctgctgtgg cagcagccag cagtctggag
      361 attgctgctg acctgggtgt ggaagacttc acacaaatgg tgttggagga ttcatgctca
      421 gaagacaccc caattcttct tcctctcttc tcctgctttc ctccttactc tgctctctga
      481 tgtgctgaaa actcctaaaa atgttctgta ttctcctcag aaaatatcaa tccctcgttt
      541 cttctgtgtt ataaatttaa aaagccttga taatcctccc tgacaagatg attgcatatt
      601 ttttcatggc ttatcctgtt tcccatctca tagtcatctt ttccttccaa cagaccatgg
      661 tatccagagc tattgtcctc ttttagaagt gtgtgtcttt tctttgatgt tatataaact
      721 gctgtactct atctgtataa ctttatttct ctttgtaata ttaaacttgg tttgaataca
      781 taaa
//
