LOCUS       XM_039103675            3584 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC103691564
            (LOC103691564), transcript variant X2, mRNA.
ACCESSION   XM_039103675
VERSION     XM_039103675.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3584
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3584
                     /gene="LOC103691564"
                     /note="uncharacterized LOC103691564; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 2 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 146
                     samples with support for all annotated introns"
                     /db_xref="GeneID:103691564"
                     /db_xref="RGD:9437635"
     CDS             863..1597
                     /gene="LOC103691564"
                     /codon_start=1
                     /product="uncharacterized protein LOC103691564 isoform X1"
                     /protein_id="XP_038959603.1"
                     /db_xref="GeneID:103691564"
                     /db_xref="RGD:9437635"
                     /translation="MAAATLPSTGPCVRLRSLRVLAVAERTQELSPSSLEGEGGGGRG
                     GAVGAARTASPYSPFNSSASRGAATAAPPPLVSGARGSGVLLPLQLSPAIPPLCYGAA
                     DPLTSPGAGQLELTRNQAFLLLLSFDFLAPWSPLHSARRRPELQSATRTGAQVPPPSP
                     LPRVPSTSRFPRFQGASCAPDSARLHFLPESPVSTFFLIPRSLGRSRNLPNPNGSRPH
                     PRFGGFLLLVLEKEPPSGEPELGPRV"
ORIGIN      
        1 cacccaggcg gtgatatcac cagcagccaa cagctcggaa ttcagaaagt taagtgtcac
       61 ccagcaattt gggtcccggc tggagcgtcc gcacggcgcg ggctgcacct cgctcagaag
      121 ccagggaggg ggaaggggtg ggtggctgag ttcgcccggg ggcagcgcag accagggcca
      181 gccgcctccg gaacgcagag cgttcgagcc tggtggggag cggcgtgcac tacctagcca
      241 tgatttcatc ttttttcttt tcttttcttt tttttttttt tttttctttc cgggaggagc
      301 gcccggggct accatgtgtc tggccgggtg cgatgcgatg gaagacccac ctaaactccg
      361 ccctagtggt cgccggacgc agcgactcag ctaggaaaag ggcagacggt cggagagggg
      421 aagtcgaagt ggttgaaacg cagctgctcc gcggagatcg cgggcctcaa gggactgccc
      481 tccggcgccc tcccatcctc catccccgca aggactaagg ccaaggtgct aggcagcgtt
      541 gcaactccca gggaggatgc tgccgtggcc cggctggatg caggggccca gccttcccag
      601 ggccgcgggg ccccattccc tgcccgtgcc ccaccgcgcc ccgcgcgctc ccggcggcgt
      661 ggcgtaggca gtgcagcccc cgcctgagcc gagcgacccg ccatccgctt agggaccgcg
      721 gtggccttcg gctcggcccc gccgagtcgc agaccatcac tcttggtgct ttcggcccag
      781 gcgcctgtcc ccactccagg gtcctggaga aaagcctgcc gtaccttcca cggcttcctc
      841 cactacctcg tcgtcgctat ccatggcagc tgcgacccta cccagcacgg ggccgtgcgt
      901 ccggctccgg tccctccggg tgctggcggt ggctgagcga acgcaggagc taagcccttc
      961 gagtttggag ggggagggag ggggaggaag aggaggagca gtcggggccg ctcgcactgc
     1021 ctccccctac agtcctttta attcctccgc cagccgcgga gccgcaaccg ccgctccccc
     1081 tcccctcgtc tccggtgccc gaggctccgg ggtgctgctg ccgctgcaac tttctcctgc
     1141 gataccccct ctttgttatg gagcagctga tccgctgaca tcacccggcg ccggacagct
     1201 agagctcact cggaaccaag cctttctgct gctcctgagc ttcgacttcc tcgcgccctg
     1261 gagcccactt cactcagctc gccgccgccc agagttgcaa agtgcgacgc gcacaggagc
     1321 gcaggtgccc cctccctctc cactgcccag agtcccctcc acaagccggt ttcctagatt
     1381 ccagggggcg tcctgcgccc cggattccgc ccgactgcat tttctaccag agtccccagt
     1441 ctccaccttc tttctcattc ccaggtccct agggagatcc aggaatttac caaacccaaa
     1501 tggcagcagg ccgcacccga ggtttggcgg gttccttctc cttgtcttgg agaaggagcc
     1561 accaagcgga gagcctgagc taggaccccg tgtctagcgc gcttcctctc gcctccggtc
     1621 ctacacttgt gatgtcccca gatgtctctt tagtttctcc aagtgccaac cacttcaccg
     1681 actcaggcat ctttgaggga agaaaccccc ttcccagccc agccacttaa cgagtgtcat
     1741 tatggtgcta cctcttacag gtggcagcaa aggaccactt taaatagcgg gttaaatggc
     1801 tacacatgta cagaatgtac catggaatta cccggtgtcg gtctggcctt ctgccaagaa
     1861 cagtcatcgt ggcgggtagg gcaggagggt aagtaagtta ttccgtttgg ttttctgaac
     1921 aatgaataag gcaggatttc aaggcacttc caaggcctcg gagagtcagc acccccaccc
     1981 ctaacatccc cttcttttct taaatgtcct ttggtggggt gaagtattgt aggcagggtc
     2041 tcctgtagcc cgggtctcta acctctaact cactaagtac aggaggatga ttttggttag
     2101 gagaactaac catctcgcct ccatcgccac agctcgctcg gcaattacaa acattggcca
     2161 gcatgctgag tttacaagac tggttcttcc gtgctaggga agcaggctct ctaccaattg
     2221 agcagcacca ccactggcta atatatatgt cagaaaaata gaaaaaaaaa gagcaaaaga
     2281 aacggcgtgg tgacgttaat cccagcacta gggaggcaga ggaaggcaga tctctgagct
     2341 caatgctagc ctgtttggtc tacagagtga gttccaggtc agcccgggct atgtagagaa
     2401 atcctgactc gaagggggaa aaaaagcatt taagagaaaa gttatagaga cactagcccc
     2461 aaatattatc agaaagttta gctccactct gctttagaaa gaggaagact gtggatgttc
     2521 agttagcagg cttagggtcc agtctctcac ctgcaaacac accagggatg ccactctggc
     2581 agtatggact tctcctgagc attagatggt caggccccgt ggggagagac ttctctggtt
     2641 taggctggat taccctttgt acctttagcc tagactacac cactgtacac tctgacccag
     2701 gctacattgt tgtgaaatct tctagacccc tttgaggtct gtcttggggt tgatctcctt
     2761 aaggttttcc agggcagata cctgggtcct taggctccac aaaaatctac ttctgcgagg
     2821 aaatgtgaaa ggataccttc agattataat ttaaatttta atctttttta aaaagatttt
     2881 atttgtgtgt gtgtatgtgt gtgtatttgt gtgtatgtgt gtgcatgtgt atgtgtatat
     2941 gtgtgcatgt gggcatgtat gtgtgtgtgc gcgtgcgtgt gtttgtgtgt gtgtgtgtgt
     3001 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtacctaa ggaggctaga gagcattgga
     3061 tgcctggaac tggagctaag gcagtggtaa accttggatg tgggtgctgg gaaccaaatg
     3121 tgggtcttct gagtcatctg cagccccata gaacatcgct ttaaaacatg aagacagaaa
     3181 caggatttta ctgagtgtgt gtgcggtgtg cacatgtcta cgagtgtgag ctagacagag
     3241 tctctcatgg agtagatgag gcctcagata ccaacctgtc tctgccttcc cgggggttgt
     3301 gttgcaagca tataccttca cacttgtctt tttttgtttg tttgctttgt tttaagccat
     3361 ggattgtgga gttgaagaat cttgccagtc cttattcaga gtctttgaga aggcatttac
     3421 tgtgcttcat ccctttctgg tttgagctat gtgatatctc ctctcatttc cagcctctta
     3481 tgtatcaata ccatcctcac acatgatgtt gatactcacg tgatgaagaa tatcacatgc
     3541 tcatctcctt caggttctac acaataaaaa tgctgaaaac agaa
//
