LOCUS       XM_039103453             422 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L36 pseudogene
            (LOC103691423), mRNA.
ACCESSION   XM_039103453
VERSION     XM_039103453.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103453.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..422
                     /gene="LOC103691423"
                     /note="60S ribosomal protein L36 pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 long SRA reads, 27 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:103691423"
                     /db_xref="RGD:9314470"
     CDS             49..363
                     /gene="LOC103691423"
                     /codon_start=1
                     /product="60S ribosomal protein L36-like"
                     /protein_id="XP_038959381.1"
                     /db_xref="GeneID:103691423"
                     /db_xref="RGD:9314470"
                     /translation="MALRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMI
                     REVCGFAPYQRRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAA
                     KD"
ORIGIN      
        1 aaagcagcat cacacttcct gtccagccgc catcggaaag ctgcagccat ggccctgcgc
       61 taccccatgg ccgtgggcct caacaaaggc cacaaagtga cgaaaaacgt cagcaagccg
      121 agacacagcc gccgccgcgg gcgcctcacc aagcacacca agttcgtgcg cgatatgatc
      181 cgggaggtgt gcggcttcgc gccctaccag cggcgtgcca tggagctgct caaggtgtcc
      241 aaggacaagc gagcactcaa gtttatcaag aagagggtgg gcacgcacat ccgcgccaag
      301 agaaagaggg aggagctgag caacgtgctg gcagccatgc ggaaggcggc ggccaaggat
      361 tgatgacccc tcccccaata aaagatggtt cttaaaaaaa aaaagaaaag aaagaaagaa
      421 ag
//
