LOCUS       XM_039098075            1641 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 40S ribosomal protein S12-like
            (LOC103691288), mRNA.
ACCESSION   XM_039098075
VERSION     XM_039098075.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1641
                     /gene="LOC103691288"
                     /note="40S ribosomal protein S12-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 1 Protein, and 95% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:103691288"
                     /db_xref="RGD:9305038"
     CDS             1..435
                     /gene="LOC103691288"
                     /codon_start=1
                     /product="40S ribosomal protein S12-like"
                     /protein_id="XP_038954003.1"
                     /db_xref="GeneID:103691288"
                     /db_xref="RGD:9305038"
                     /translation="MRPLAATGSHCTGFRSWNQTSEAEARVRSRFGVTCNPPPRPRKE
                     GKAAGGEVDVNTALPEVLKTALIHDGLARGIREAAKALDKRHALLCVLASDCDEPMYV
                     KRVEALCAEQQINLVKVDDNKGTVECRLKGESFWTTVMMAVS"
ORIGIN      
        1 atgcgtcctc tggcggccac agggagtcac tgcactggct ttaggagttg gaatcagaca
       61 tcggaggcgg aagcaagggt gcgttcaaga tttggcgtca cctgtaatcc accgccacgg
      121 ccgaggaagg aaggcaaagc tgctggaggt gaagtggacg tcaacactgc tttaccagag
      181 gtgctgaaga ccgccctcat ccacgatggc ctagcacgtg gcatacgcga agctgccaaa
      241 gccttagaca agcgccacgc ccttctctgt gtgcttgcat ccgactgcga tgagcccatg
      301 tatgtcaagc gggtggaggc gctttgtgct gagcagcaga tcaacctggt aaaggttgac
      361 gacaacaagg gaacagtgga gtgtaggctg aagggtgagt cattttggac cacggtgatg
      421 atggcagtat cctagagatg acagaagaac aaactgaatt aatgtactgt gatgattaag
      481 aagtttttac tggggctcaa aagaagaaga gaggaggctg cacacgacac atttgcctgc
      541 atctcattgt ccagaaaaca ctactgctga cccttaggcc acactttcct gcaagatggg
      601 ctgagaaccg cagcccccac ctctgtggcc agaaatctgt tacagaacaa aaaccgggtc
      661 ttgggaatta gctggaagat tttggccaca aatcatcaaa acagctaagg ttagatagtc
      721 tgacttagaa atggactgat ttgttttttg ttttaaagaa ggcaaagact tcaaaggcga
      781 cccagactca agcctctggc cattaccctt atgctttgtt tgtaattaag cttaattggt
      841 gacatcattg tttggagtgt gcatcttaat gcctgccctg gtgacattat ctcagcgctg
      901 tctctggctg ttgtcctatc agtaggctta tgctgaattt gtctgttgca ttattagaag
      961 tctttgcctg cctgattatc atctcattat atttagcagg gccatctgga ggcttcatct
     1021 gctaggagac gaagggagaa gtctgggtgg tcagctgtct ccttgttaca taggactgat
     1081 gagtcactca cttggaaaac attgctgatg tctgcccctt ctccttggtg gctttatgag
     1141 accacaacgg ccagctcaca ctgtaggggc tctgtgtttc cttctcttca tatattcctg
     1201 gctttccagc tatgaagccc atgttctctt tatacacata cacagaaaca gatgcatgta
     1261 tgttcttcca gactgacatg tcttaacaaa tggagcaaaa gctcaagtag atatttcttt
     1321 aaaatgaact aaaatggtca gtcatgctag tacccaggag gcagaggcag ctggatctcc
     1381 atgagtctga ggctagtgag ttccaggata cagccaagct acatagtgag atcatgtcag
     1441 ccatgaccaa ccagccaacc agcaaacaac ctccccaaat aaacaaaaag cttcaaaatc
     1501 aactgaagtc aatccttcac agtttttttt gtgtgtttta acacacattt ttgcatacgt
     1561 tgtgtatttt catttgtgat tgtgaattct tggaatgctt ttacactcaa catttttgaa
     1621 aattaaaact tatttacttt g
//
