LOCUS       XM_039097963            3261 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC103691253
            (LOC103691253), mRNA.
ACCESSION   XM_039097963
VERSION     XM_039097963.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3261
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3261
                     /gene="LOC103691253"
                     /note="uncharacterized LOC103691253; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     ESTs, 1 long SRA read, and 97% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:103691253"
                     /db_xref="RGD:9425804"
     CDS             1..2316
                     /gene="LOC103691253"
                     /codon_start=1
                     /product="trithorax group protein osa-like"
                     /protein_id="XP_038953891.1"
                     /db_xref="GeneID:103691253"
                     /db_xref="RGD:9425804"
                     /translation="MTNEAQGIVERFRNLQEVDTRESSAWAAGDQPSRGASRKSKAWA
                     RRHSRAAQPQSPKALGRARAGEERLFPPVDPAPRNTPSARRRLRRQDGPRATLCPGCP
                     RRSQPAPFTKLSFLLRPTRKVRSQRGRRGQRAEGEEEVVPAGARLGRGNARAARPRPC
                     SPPRPPAPPRLWRAEPRAPLAAAAADVAPAAPRSQQCRAGKTKGIRFASFPASHLHSR
                     GTARDPGPTGAAPPGAPSHARPDLSPPTPVSTPPCPLAFQAQGLPHPVMLGLLVPRDP
                     AVLSPRRAARSSEIASGPRARTHRAPGASPGRLGNRRQTPPPLPSGRRCAPGFSFLFF
                     PILMGRKVTAYFAFINSHHNNKNPGAKGGQQAQSVARGRGPEPPGGGPLPGVVYGHRA
                     GGADQRCPRMPARCPSPSSFSRSGAVRRGHGAPASGRRRRKAQRKGKERTEAARAAAP
                     VPSGCAGARREARYFSLQIGSLRGLAATRKCILALRAAEGAGQGRHSPAQPRASTETL
                     GTRRGPAAGGVTSPSFFLLPFHVGPATWGDASSGGPRHRPPGGPGSIRPPPRPLSRPA
                     LYSAPRLQLPPGPRAGHGCRPRLVRSGAGRPQGALALPDPRSGRPCQGGSAGCGCARR
                     LVCVLELATMCSLREAKCFYTFRNVFLLSECRWGYFESLALVRSPASLRPCGPRGRVC
                     SAISRSRVHKCLGALRLKSGLSTTRGHSGRARLASIWAGFLGHDPQHLSAVPGREPAP
                     CAQGPPGLPDFKRASSKDPCGAKQSPCMQLF"
ORIGIN      
        1 atgaccaatg aggcccaagg tattgtggag agattcagga acctgcaaga agtggataca
       61 agagaaagct cagcgtgggc tgcaggcgac cagccaagcc gcggggcctc ccgcaaaagc
      121 aaggcctggg cgcgccggca ctcccgcgct gcccagcctc agtcgcccaa ggcactggga
      181 agggcgcgag ctggagaaga aaggctcttc ccgccggtcg atccggctcc gcggaacacc
      241 ccaagcgcaa ggaggcgact gcggcggcag gacggtcccc gcgccacgct atgtcccggg
      301 tgcccaaggc gctcccagcc agcccctttt acgaaacttt cttttttgct tcgccccacc
      361 cgaaaagtgc ggtcccagcg agggcgccga ggacagcggg cggagggcga ggaggaagtg
      421 gtgcccgcgg gagcgcggct gggcagagga aatgcccgcg ccgcccgccc ccgcccttgc
      481 agcccgcccc ggccccccgc cccgccgcga ctttggcggg ccgagccccg cgcgccactg
      541 gcggcggcag cggcagatgt ggccccggct gccccaagga gccaacaatg ccgggccggc
      601 aaaacaaaag ggattcgctt cgcgtctttc ccggcctctc acttacactc tcggggaacc
      661 gcgcgggatc ccggaccaac aggggccgcg cccccagggg ccccgagcca cgcgcgcccc
      721 gacttgtccc cgccgacccc ggtctctact cccccctgcc cgctcgcctt ccaggcgcaa
      781 ggcctgccgc accccgtcat gctcggactc ttggtcccca gggatccggc cgtattgtcc
      841 ccgcggcgcg cagcgcgctc gtctgagatc gccagcggcc cccgcgcgcg cacccaccgg
      901 gctccaggag caagcccggg gcgcctagga aaccgtcgtc agacgccgcc gccgctgccc
      961 tccggacgcc gctgcgcgcc gggtttttct ttcctttttt ttccaatcct gatgggaagg
     1021 aaggtgaccg cctacttcgc attcatcaac tctcatcaca acaacaaaaa tcctggagca
     1081 aagggcggcc agcaagcgca atcggtggcg aggggcagag gaccagaacc cccaggcggg
     1141 ggtccactcc cgggcgtagt gtatggacac agggctgggg gcgctgacca aagatgtcct
     1201 cggatgccgg cccggtgtcc ttcgccctcc tccttctccc ggagtggcgc agtgaggcgc
     1261 gggcacggtg ccccagccag cggccgcagg aggaggaaag cgcagagaaa aggaaaggaa
     1321 aggacggaag cggcgcgggc cgctgctccg gtgccctccg gctgcgcagg agcgaggcgg
     1381 gaggcgagat acttctcact acaaatcggc tctctccggg gattagcagc tacacgaaag
     1441 tgcatactgg cgctgcgggc agccgagggg gccgggcaag gcagacactc cccggcccag
     1501 ccccgcgcct ccactgagac tctggggacg cgcaggggtc ccgcagccgg tggggtgact
     1561 tcgccctcct tcttcctcct ccccttccac gtggggcccg ccacgtgggg agacgcgagc
     1621 tctggcgggc ctcggcaccg tcccccgggt ggccccggct cgataaggcc cccaccacgc
     1681 ccgctcagcc gacctgcact ctactcggcc ccgaggctcc aacttcctcc tgggccccgc
     1741 gcaggccacg ggtgccgtcc caggctcgtg aggtcaggcg cgggccggcc acagggggca
     1801 cttgcgctcc cagatcccag atccgggaga ccctgccagg gaggtagcgc tggctgcggg
     1861 tgcgcgcgga gactggtctg tgtgctggaa cttgccacga tgtgttcgct acgagaagcc
     1921 aaatgttttt acacatttag aaatgtcttt ctgttgtctg aatgtcgctg gggctatttt
     1981 gaaagccttg ccttggtcag gtcaccagcc tctctgagac cttgcgggcc caggggtcgc
     2041 gtgtgcagtg ccatttctcg atcacgagtc cacaagtgtc tcggtgcatt gcgattgaaa
     2101 tctggactct caacgaccag gggacacagc ggccgcgcga gactagccag catctgggct
     2161 ggattccttg gccatgaccc gcaacatcta agcgctgtcc ccggaaggga gccggctccc
     2221 tgcgctcagg gccccccagg cttaccagac tttaagcgcg cgtcttctaa ggacccctgt
     2281 ggcgctaaac agagcccttg tatgcagttg ttttaaaaat cgtttggggt gctagcgact
     2341 ggattgagat gttaggttgt atgatcgaga gggggtgtcc agggtcacaa ctttgaagac
     2401 cacagggacc gccattcaga gagccacgta aagtggtgtg ggtggcctcc tcgcgaccgg
     2461 agaaatttat agcagaggcc tccgagcccc taaacccatc gctgagcgtt cttcagagcc
     2521 ctgcctttct cgggctttat cacggcctgt ttgtcttact taaactgaac acccagatgc
     2581 cgggcgtgag actagcaatg tggggtttct atgttatgta gccaaactgg gttttaaact
     2641 agattgaaaa tcttttctga aaggtaaaac gggtatggtc cctctcagac caacctttca
     2701 tgatattccc gtggccccaa tagtccaggg gctggtcttg atgttctgtg aaaggtatac
     2761 acccgcctct gacccagtgg tctccatctt ccagggctgt gtgctcacag attcctctta
     2821 agagttcact tcttcccaac agcttcgctc caggtccatg aggcccagga cttgctggca
     2881 aattgacctt gtccatacca gggcttctgt gtcaccaatg cctgctttct ggtcctacct
     2941 atggtagttc ctgctctttt gtttctcaga tctttaccct tcgtggtccc ctattctcac
     3001 caagaaacca cagtcagctg gcttttccta ttgcttcttc agctttcctg tggtctgatt
     3061 ttgaattcca ctttagaaaa atgcttccgt gggccctgca ggatgcctca gcctacaaag
     3121 ctgctatcaa gccagaggat ctgagttcag tccttaaagg ctgggtgaag acggaaggaa
     3181 agagtagact aagttgtctc agacccctgc atgagtacca catatcacac aacaataaaa
     3241 tactaccctc tttcttatga a
//
