LOCUS       XM_008759940            3892 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 239-like
            (LOC103691238), transcript variant X1, mRNA.
ACCESSION   XM_008759940
VERSION     XM_008759940.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008759940.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008759940.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3892
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3892
                     /gene="LOC103691238"
                     /note="zinc finger protein 239-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 2 long SRA reads, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:103691238"
                     /db_xref="RGD:9074604"
     CDS             908..1921
                     /gene="LOC103691238"
                     /codon_start=1
                     /product="zinc finger protein 239-like isoform X1"
                     /protein_id="XP_008758162.1"
                     /db_xref="GeneID:103691238"
                     /db_xref="RGD:9074604"
                     /translation="MEFAAPGVTRENLDGAKLLENRTSKFSGAPRSPLDREAVLHERP
                     LLARPEQPAPEEKLLDGQYLSRSGSGPQEEAFAKTSDPAVPKAFKCRNCGLAVASLSD
                     LIHHQSSHGCDRPYSCPECDKSFRRGSDLVKHYRVHTGEKPYPCPECGRCFSLSSNLT
                     KHRRSHSGLRPHKCMECGEAFGRSADLAKHQRVHTGEKPYACAECGKTFRVSSNLIQH
                     QRTHTGEKPYRCGLCGKSFSLSSNLLQHQRCHTGEKPYFCAWCGDSFGRSSYLLEHQR
                     SHTGEKPYNCCECGKNFTNSSNCLRHQRTHNGEPPFRCLECGRGFSEITMFTEHQRIH
                     LSK"
ORIGIN      
        1 gagcccgccg cgtgcccgga agcgctcaat tccctctgct gccttgatgt ggcgcgtgcg
       61 aagagctaag agcacgcggc ccagggctgt ctcgttggta gctgggtcct ttcccccacc
      121 tggcccctcc ccggccgctg ccgtgagttg cgcgaggcaa aacgagagcg agtccgtaag
      181 ggccggtctc gcagccgcca tcttggcccg ggcctaaggc tccgccccgc gtctcgccgg
      241 tactctgaga gagcggaact ggaagagggg ggcgtggcca ggctgctcct ctgaatagcg
      301 ccgccgcagt tatcttgcga gtcggaagtt gaagttctag attctggaac tcgggtactt
      361 gcacagtcgc agaagacatg gcgagaatgg tatttatctg tgtgaaagta agaggcgcgt
      421 gcaatgcatg ctgggatatg tagtcggcgc caagcttagt gcagcttgag gtgggtgtga
      481 aactcctccc aggccgaaga gtgagctgtt gctccaagaa tcagacgccc cactgtggag
      541 tcttagggct gtcccttgct ccccaacgtg gcttagctac ctcgctcccg gtacgtcctt
      601 gtcagcgacg ttcagacttt cttggcaacc ctcaagcgcg gcgatcaagg gccctgaaag
      661 ccagactgac cgactcgcag aaccccaagc ctttcaaaag tgctaggttc ccgacaggaa
      721 ggtctcgcta agcgaatgaa agtgttaaac ctaccgggaa agttcgctgc cgcttcctag
      781 agtctctcgg gcttggggac ctttccgttt ccggtgctgg cctccaagcc tccagtgccc
      841 cattctccca actgtgctga tgagttagac aggtggcatt tagaaaaccg agcgcctttc
      901 ggccgcaatg gaatttgcgg cgccaggagt gaccagggag aatttagatg gagcaaagct
      961 gctggagaac cggacatcaa aattctcggg agcccccagg tcgcccctgg atcgcgaggc
     1021 tgtgctacat gagcgccccc tcctggcgcg gccggagcaa ccagcccccg aggaaaaatt
     1081 gctggacggg cagtacttaa gtaggtcagg ctctggcccc caggaagaag cctttgccaa
     1141 aaccagtgat cctgcagtcc ccaaagcttt caagtgcagg aattgtgggc tcgctgtagc
     1201 cagcctctct gacctcattc accatcaaag cagccatggg tgtgaccgac cttacagctg
     1261 tccagagtgt gacaaaagct tccggcgtgg ctcagatctt gttaagcatt acagagttca
     1321 cactggtgaa aaaccatacc cctgcccaga gtgtggccgt tgcttcagcc tcagctctaa
     1381 tctcactaaa caccggcgtt ctcactcagg cctccgtcct cataagtgca tggagtgtgg
     1441 agaggccttt ggtcgcagtg cagacctagc aaaacaccag cgggtgcaca ctggggaaaa
     1501 gccttatgct tgtgctgagt gtggtaagac tttcagggtt agctccaacc tgatccagca
     1561 ccagcgtact cacactgggg agaaacccta tcgctgtgga ctctgtggca agagtttcag
     1621 cctgagctct aaccttttac agcaccagcg ctgtcacaca ggtgagaaac cctacttctg
     1681 tgcttggtgt ggagacagct ttgggcgcag ctcctatctg ctggaacacc aacgctcaca
     1741 cacaggtgag aagccctaca attgctgtga gtgtggcaag aacttcacca acagctcaaa
     1801 ctgcctacgg caccagcgca ctcataatgg agaaccgccc ttcaggtgtc ttgagtgtgg
     1861 acgtggcttt agtgagatca ccatgtttac tgaacaccag cgcatccact tgagcaaatg
     1921 acctttccag aatgtagcaa aaatcttaca ccacagctcc atcaatgttc acacatgggc
     1981 aagaaaccct agaagtttcc tgattacagc tagtattttg tggacaccac cagcatatgc
     2041 acacaggcaa agccttacat ttgcaggaag tttgccaaga gcttcagtca gatttcccac
     2101 ttgctcttct accaggtgac ccacattagc aagaagacct ccatctgcct gtaatatggc
     2161 aaggcctttg cccataactc ttaactttgt ctagcatcaa tggatattct aagatgagag
     2221 cttcttcagt tatccctggc tttaatttta gtccagactt tgtctctggg tttggttcag
     2281 tcctgagaaa cctaaaggga ccgggttttt tgtttgtttt ttaaagcaga ccttttctgc
     2341 atccctaagg tgacttcatt aaggtcctat tattaaataa tagggctcac taatgggtct
     2401 gggttgagga gccacaggct agacaaacag cactagagct gtgtcttcct tcagagaaac
     2461 aaggtttaca cacacacaca cacacacaca cacacaagtc ctgttgtctg agatttcagt
     2521 ccgaatctcc attagctaga ggaaagcttt tagatgccca aaaccacata gctctgcccc
     2581 agctggatat aggttaacca taacaaacca acaactactg gaagaagaga actgattaca
     2641 cacccggcaa agtctgtgtg aggactacag aggcagacca gaggagatga taaaaggata
     2701 tgttctagcg aaaggaccag agaatttgac cttgggattg ttacataaac tctgggtata
     2761 ggatcccatt taaggagctc ttcaccactt attaactgtc tttactgttt acactagggg
     2821 ggtggagact gaggtagaaa caaagaaata gacgttgagt tcagattact ttatagtatt
     2881 tctaggcagg ggcaaaggct caagatttgt catctggtcc ttttccagtc ttcaatccct
     2941 tcccttaaaa aatcctcctt ccccacttca cttccctttc cttactccca tcagtggaag
     3001 aatagtgaag acgtctggat tttggagatt cagtgtagcc tttttgtctg atgtagaaga
     3061 ggttgcccac acaaatgtat ttctactgct aacatcatat atgggaatca ctaggtttct
     3121 cagagcacta catagtcttt gatctgagca gagctcgagc aatgagggac tgcttgtttt
     3181 ccctagaggt gcatttgtgt gcaccagatg tatacaagtg tcttctcaac ctttcctctg
     3241 ccctccaatt gtgctgccat ttataaagct tgctgtagag ctgtctgtat agagtaaaag
     3301 ggtaaaagag gaagagtatc aggtcaccca gcctcaggtt ctaagtgact aggtttgtct
     3361 ctagtcgtgt gactcactac tttttctggc tttcagtctc ttcatctgaa atgtgcagtc
     3421 tacctcacca ggctgtgaat attccatgga tatacctact ttcatgaagt gcctggttag
     3481 gggaatggct tagtaagctt cagttctcaa acctggagtc ctattgattg tatcatttag
     3541 aaagtatcat ggcaactcat ggatcagctt ctaagattgc agaaatgaac tagacactcc
     3601 tggagtagcc tattttcaat ggaacaataa taacagcaaa taacgctggc agtggagacg
     3661 ggatgtcacc tggagcaaat ctgaaaggca taggtgatac ctaatgaaca cctctggctc
     3721 ttcaaactgt gtaggggaca cttcaagcag gagtgagtaa ttaaagaaat tattgatgtg
     3781 ttcccatcaa cagtacttaa aaaacacaac cccagggttt gagttgaata tctgagcata
     3841 gcatatacat agttgggact caataaatgg ttgttatggt ttggttctgt tt
//
