LOCUS       XM_039097424             455 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NADH dehydrogenase [ubiquinone] 1 beta
            subcomplex subunit 4 pseudogene (LOC103691107), mRNA.
ACCESSION   XM_039097424
VERSION     XM_039097424.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097424.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..455
                     /gene="LOC103691107"
                     /note="NADH dehydrogenase [ubiquinone] 1 beta subcomplex
                     subunit 4 pseudogene; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 long SRA read, 5
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:103691107"
                     /db_xref="RGD:9202400"
     CDS             1..405
                     /gene="LOC103691107"
                     /codon_start=1
                     /product="NADH dehydrogenase [ubiquinone] 1 beta
                     subcomplex subunit 4-like"
                     /protein_id="XP_038953352.1"
                     /db_xref="GeneID:103691107"
                     /db_xref="RGD:9202400"
                     /translation="MTRAKKSFSKYKPAPLATLPSTLDPAEYDVSPEARKAQVERMSI
                     RARLKREYVLQYNNPKRQMHIEDPALIRWTYARSANVYPNFRPTPKNSLLGAVAGLGP
                     LIFWYYVIKTDRDKKERLIQEGKLDRKFSISY"
ORIGIN      
        1 atgactagag ccaagaagtc gttttccaag tataaacctg cacccctggc cactcttccc
       61 agtacccttg accctgccga gtatgacgtg tctccggagg cccgaaaggc gcaggtcgag
      121 cgcatgagca taagggcccg gcttaaacgg gagtatgtgc ttcagtacaa caaccccaaa
      181 cgccaaatgc acatcgagga tcctgccttg attcgttgga cctatgcaag atcagcaaat
      241 gtttatccta atttcagacc cactcccaag aactcacttt taggagcggt ggcaggttta
      301 gggcctctca tcttctggta ttatgttatc aaaacagaca gggacaaaaa ggaaagactt
      361 atccaggaag gaaaactgga cagaaaattt agcatctcct actaagttcg gcaagggtgc
      421 ctctgttctt gcatcaataa atctcctatt aatca
//
