LOCUS       XM_039095043            3950 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC103691104
            (LOC103691104), transcript variant X1, mRNA.
ACCESSION   XM_039095043
VERSION     XM_039095043.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3950
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3950
                     /gene="LOC103691104"
                     /note="uncharacterized LOC103691104; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 10 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:103691104"
                     /db_xref="RGD:9394835"
     CDS             2110..3441
                     /gene="LOC103691104"
                     /codon_start=1
                     /product="flocculation protein FLO11-like isoform X1"
                     /protein_id="XP_038950971.1"
                     /db_xref="GeneID:103691104"
                     /db_xref="RGD:9394835"
                     /translation="MQLTGRSPWCVNVDNVSSTSSVKGESGRKIHIKPKKSQNSFRKS
                     GVYVSSRVDPILEVWEENTSATDEKTKMENFHSVPSEAAADVGPSTSTADSLDAAEPA
                     QTKSTKEAASLTAVEPEPTKSTIAADSLTAVEPAQTKSPKEAASLTAAEPALTKSTKD
                     AASLTAAEPAPTKSTNAADSLTAVEPVPTKSTNAADSLTAVEPVPTKSTIAADSLAAD
                     EPAPTKSTTAAEGLTADEPAPTKSTTAADGLTADEPEMSLTYAADSTVSGDSGPASHI
                     GLDYVVDLPLYKESTRYKPHADPERTPGSCTCYSLDSIQMTNLTLLISFSEEEIFYTA
                     SSDKESSFIPDIEEGLPATQAPVDNFDASVSAEPINHSMNPLRVGGYLRAPAIAHIPF
                     LPFIWLVSSLFSVITWMKIQIQHAWHEENGQGAPTDKKVGSGKLDKNSSLK"
ORIGIN      
        1 cccattgccg ccctcccccc accagtctag ttcactgggg gttcagtctt agcaggaccc
       61 agggcttccc cttccactgg tgctcttact aggatattca ttgctacctc tcccttccct
      121 acaatcttag tgttgttctt gatggtgaca attacttaag tatgaatatt aaaatgatat
      181 taaatgattt gaaaaactca gagacaaata tttagaaagc ttatgacaca ggaaatacgg
      241 agactgttcc aacacaacaa aagaacagca gtaccaggat tactacatag ttcagtagtt
      301 cagttcgtga gtcatgaacc aagacaaaga ataagctaga tcagctgttg gtccacttca
      361 gtatttttta ttttgacaca gtttgccact gaattaaagg tcatgtgtgt cattggcaaa
      421 tgttctacca tgaataaaca cccccagtcc ctgagtctga aattttataa tttctgactc
      481 taaaaatgac agcataagcc acatgtttag aattatacat acataatcac aggtaataaa
      541 tagtgtttcc taatgatctg tttgagtttt gaaatgtcca atgcagcaga aaactacctt
      601 ttgctaggag gttttctgtc aactttcatc ctgtaatgaa ccagcaatgt tcttgatact
      661 gcagtccaag acatttttgt gtcatatttc agatggagct ttcaatgtgg atatataaat
      721 agttcatttc cttccacata ttctggtatt gtagaattat aaatcttgtc ctagactttg
      781 ttaatgttta gctctacaaa atgatcttac aaagctatat tcctttccat atgaaataaa
      841 attgtttatg ctgaaattcc ctgtttagta cacatgttta cctattgttt atgttgagcc
      901 attatttcca gacaacagat ctgtgcttta aggtgagcct ttctagagag agctcactct
      961 catttcaaaa ctttaatgct ctttgaaata tttaatttta ttttttctta ttcactttac
     1021 atcaaactca ctgaccctgt ctcagtctcc ctattctaca gtcctttccg gttccccttc
     1081 cccttcacct ctgagcagtc atggatcccc tatatatccc cacacccagg cacttcaagt
     1141 ctctgcaagg gtagacactt cctctctctc caaggtcaga caaggcagct cagctagaag
     1201 gaggtatccc atgtataagg aacagctttt tgataggccc catcccagtt gactgggacc
     1261 tatatgaaaa tccagctact cttctgctac atatgagtgg gaaggtgtga gtccagcccg
     1321 tgtatgttct gtggttggtg gttcagtctc tgagagcccc aggtgtccag gttatttcac
     1381 tctgttgttt gtcctctgga gttcttatct ccttgcagac ctggaatctt tcctcctagt
     1441 gttccctaag agtctactgc catacatccc tgagcaaggc aaatcttgtc attagagttt
     1501 ttaagtggga ggaagggagg gaggaaggga gggaaagagg gaaagattgt gtgtatgctt
     1561 tctcgagcct tttagtttgt gctctattta aaacttaacc atgcctcatg ttttctcttg
     1621 tgaaattcgg gaggatacca gtcaataatc ataatcattt gctgaaaaat gaattaaaga
     1681 ttatttgcct agacctgtag ttccatgaat tacatcccag actgtgggag gtaggagaca
     1741 catagacctt tgtgagttaa gtccaacatg gtctatgggg tgggtttcag accagcatgg
     1801 ctacatagtg agatccggtt tcaaaaaaga atgtttgtaa acatctaaac taagacacag
     1861 gggactcaaa tataaagggc ttcaaatgct cgctaaatgt ttttcttatg aatagtacga
     1921 taaccataac tttaaaatct atgccacagt gcaagaagac cagcacataa aaaaaaagtg
     1981 aagcatgtca gatttaacaa agaagtattt gtttttaacg atgaaaggcc tttgtcccgt
     2041 cgagtaagat caccaagaca gctaaaatcc attctgaaaa catctatcca gcataattca
     2101 gaagctggta tgcaacttac aggaagatca ccgtggtgtg tgaatgtgga taatgtcagc
     2161 tctacctcct ctgtgaaggg agaatcaggg agaaagatcc acataaaacc taagaagagc
     2221 cagaacagtt ttagaaaatc tggagtttat gtgtcttctc gggtagaccc aattcttgaa
     2281 gtatgggaag aaaatacatc tgcaacggat gaaaaaacta aaatggaaaa tttccattcc
     2341 gtgccttctg aggctgctgc tgatgttgga ccttccactt ctactgctga cagcctggat
     2401 gctgctgagc ctgcgcagac taagtccacc aaggaggctg ccagtctgac tgcagttgag
     2461 cctgagccaa ctaagtccac cattgccgct gacagtctga ctgcagttga gcctgcgcag
     2521 actaagtccc ccaaggaggc tgccagtctg actgcagctg agcctgcact gactaagtcc
     2581 accaaggatg ctgccagtct gactgcagct gagcctgcgc cgactaagtc caccaatgcc
     2641 gccgacagtc tgactgcagt tgagcctgtg ccgactaagt ccaccaatgc cgctgacagt
     2701 ctgactgcag ttgagcctgt gccgactaag tctaccattg ccgctgacag tctggctgca
     2761 gatgagcctg cgccgactaa gtccaccact gccgctgaag gtctgactgc agatgagcct
     2821 gcgccgacta agtccaccac tgccgctgac ggtctgactg cagatgagcc cgagatgtcc
     2881 cttacatatg ctgctgacag tactgtgtca ggtgactcag gaccagctag tcacattgga
     2941 ttggattatg tagttgattt acctctttac aaggagagta caaggtacaa accccatgct
     3001 gacccagagc gcactcctgg ttcctgcact tgttattccc ttgactccat tcaaatgact
     3061 aacctgactc ttttgatatc ctttagtgaa gaagaaatat tttatactgc ttcttcagat
     3121 aaggaatctt cttttattcc tgacatagaa gaaggtctgc ctgctactca ggcacctgtt
     3181 gataattttg atgcttctgt gtcagctgaa ccaataaacc acagcatgaa ccctctcagg
     3241 gtgggtggat atcttcgggc accagcgata gcacacatcc cctttttgcc ttttatatgg
     3301 cttgtatcct cacttttctc tgtcataaca tggatgaaaa tccaaattca acatgcatgg
     3361 catgaagaaa atggccaagg agctcctact gacaaaaaag ttggatcagg taagttagac
     3421 aaaaatagta gcttaaaata gatgaatttt tttcccttga aacctaggtc tgttttgtta
     3481 ataaatttca tgcttctata gggttattca tgaataacct agaacctgaa attttttttc
     3541 aatttatata ttttcagtaa cgtgataaat ccagtttgga caaatacaag tgacatgtaa
     3601 aactgttttc tgattggttg ttttctagtc tagaatgagg agattatggt cactcccagt
     3661 gaagatcttg tgtttcctga atgactaagc aggggtaact tcctgttaaa tgttattgtc
     3721 tatttaatgc tgtcattctg aactctgact tctgaggtta gcatagcctt tgaccgcaac
     3781 attccaaaag aagcaacttc tgagattaaa aataacaaga gaagcatcca ccttctcact
     3841 gtttctcact acattgatcc cgatgataat gacactgatg ttgttgatgc tgggcatgac
     3901 aatatcacca gtgatgtgcc tgatgatgct gttgataatt cttgtttttc
//
