LOCUS       XM_039090090            1839 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC103691023
            (LOC103691023), mRNA.
ACCESSION   XM_039090090
VERSION     XM_039090090.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039090090.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1839
                     /gene="LOC103691023"
                     /note="uncharacterized LOC103691023; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 43
                     Proteins, and 72% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:103691023"
                     /db_xref="RGD:9074083"
     CDS             1..1434
                     /gene="LOC103691023"
                     /codon_start=1
                     /product="cytochrome P450 3A2-like"
                     /protein_id="XP_038946018.1"
                     /db_xref="GeneID:103691023"
                     /db_xref="RGD:9074083"
                     /translation="MTDGGEGDDLMPEADSSPRMGSTDLRRAMNSSQTVSWRVFRGVL
                     AIQSHSLVLQKRADRPVLTDERRSLLCDPQGVPVRDLGPLGIMSKAITFSKVEEWKRY
                     RAFLSPTFTSGKLKEMFPIVEQHGDILVKYLRREDEKGKPAPVKQVFGAYSMDEITST
                     SFGVSVDFLTNPKDTFVEKTKKLLRFDFFDPLFLSVALFPFLTPIYEMLNICMFPKDS
                     IAFLQKFVYRMKETRLDSKHKHRVDFLQLMLNAHNNSKDEVSHKALSDVEIIAQSVTF
                     IFAGYEITSSTLSFVLYSLATYPDIQKKLQEEIDGALPNKAPPTYDIVMEMEYLDMVL
                     NETLRLYPVGNRLERVCKKDIELGGVFIPKGSVVMIPTYPLQRDPQHWTEPEEFHPER
                     FSKENKGSIDPYVFLPFGHGPRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQIPLK
                     LSIQAILEPEKAIVLKVVPWDAVITGA"
ORIGIN      
        1 atgaccgatg ggggggaagg cgacgactta atgccagagg ccgactcctc tcccaggatg
       61 gggtcaacag atctgcgccg cgctatgaac tcctcccaga ctgtctcatg gcgggtgttc
      121 cgtggcgtcc tagcgatcca aagtcactct ctggtgcttc agaaaagggc ggacaggcct
      181 gtccttactg atgagcggcg ctctctcctc tgtgaccccc aaggggtccc tgttcgggat
      241 cttggtccat tggggattat gagcaaagcc atcactttct ctaaggttga ggagtggaag
      301 aggtatagag cctttctctc ccccacgttc accagtggaa aactcaaaga gatgttcccc
      361 atcgttgaac agcatggaga cattttggta aagtacttga ggcgagagga cgagaaaggc
      421 aagcctgccc ctgtgaaaca agtgtttggt gcctacagca tggatgagat caccagcaca
      481 tcatttggag tcagtgttga tttccttacc aaccctaagg atacttttgt ggagaaaacc
      541 aagaagctct taagatttga tttttttgat ccattgttct tgtcagtagc actctttcca
      601 ttcctcaccc caatatatga gatgttaaat atctgcatgt tcccaaaaga ttcaatagca
      661 tttttacaaa aatttgtgta cagaatgaag gaaacccgtc tggattctaa gcataagcac
      721 cgagtggatt ttctccagct gatgctgaac gctcataata attccaaaga cgaagtgtct
      781 cataaagccc tgtctgatgt tgaaatcata gcccagtcag ttacctttat ttttgctggc
      841 tatgaaatca ccagcagcac actttccttt gtcttgtatt cactggcaac ttaccctgac
      901 atccagaaga aactgcaaga ggagattgat ggggccctgc ctaataaggc acctcctacc
      961 tatgatattg tgatggaaat ggaatacctg gatatggtgt tgaatgaaac cctcagattg
     1021 tatccagttg gtaatagact tgagagagtc tgtaaaaaag acatagaact tggtggtgtg
     1081 tttataccca aagggtctgt agtgatgatt ccaacatatc ctcttcaacg tgacccacag
     1141 cactggacgg agcctgagga atttcatcca gaaaggttca gcaaggagaa caagggcagc
     1201 attgatcctt atgtatttct gccctttgga catggaccca ggaactgcat tggcatgagg
     1261 tttgctctca tgaatatgaa actcgctctc actaaagttc tgcaaaactt ctcctttcag
     1321 ccttgtaagg aaacacagat acctctgaaa ttgagtatac aagcaattct tgaaccagaa
     1381 aaagccattg ttcttaaggt tgtgccatgg gatgcagtca taactggagc atgactttcc
     1441 ctgaaggaat tttattgggc tcctcacaaa ggcagtgtct aagaacattg aaccttttaa
     1501 atttatttca tgaatgaatt ccagataaaa ctggggctta attgactggt cttgatgcct
     1561 ggttaaagat tcagcacatt tattgatctt tctcagtgtc tatacaaagt accatctaat
     1621 aaacaggaga tgacaagtct gtgacagaac aggaaattct catgggacca tcttcatcca
     1681 cattcggtta tgtctgttag tttctttaga gcttttttga tagtaaacat gtctctgtaa
     1741 ttttatcaat aatattatga tgtaaaggtg aactattgta gtgactctat ttgtagattt
     1801 ggtatcagat gttttatttg gaatattcta gaataaatg
//
