LOCUS       XM_039098328            2165 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 431-like
            (LOC103690914), transcript variant X1, mRNA.
ACCESSION   XM_039098328
VERSION     XM_039098328.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2165
                     /gene="LOC103690914"
                     /note="zinc finger protein 431-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 5 Proteins, and 72% coverage of the annotated
                     genomic feature by RNAseq alignments, including 41 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:103690914"
                     /db_xref="RGD:9213653"
     CDS             355..2028
                     /gene="LOC103690914"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038954256.1"
                     /db_xref="GeneID:103690914"
                     /db_xref="RGD:9213653"
                     /translation="MRMEFNAKDALTYDDVHVNFTREEWALLDPSQKSLYKDVMQETY
                     RNLTAIGYNWEDHSIEEHCQSFRRHGRHERCHTGEKPSENTQCGKAFAQHSRLQRHKN
                     THTGEKLCECKPHDKAFTYDSQLQTLERIHSGEKPYKYNQCGKAFERRCNLGRHKLIH
                     TGRKSYKCNQCGKAFSQNSHLQTHKSTHTREELYKCKQCGKAFTCHNELQSHKRIHTG
                     EKSYECNQCGKAFKSHRYLQVHKAIHTGEKPYVCDQCGKAFARLSHLKTHGITHSGKK
                     PCKCDQCGKAFASHSYLQVHKRIHTGEKPYVCDRCGKAFASHSYLQVHKRIHTGEKPY
                     VCDWCGKAFASHSYLQVHKRIHTGEKPYVCDRCDKAFAYHSYLQVHKRIHTGEKLYEC
                     DQCGKAFASHSYLQVHKKIHTGEKPYVCDQCGKDFVVQSDLKRHKRTHTGEKPYKCNE
                     CGKAFVGQNDLKKHKRKHTGEKPYEYNECGKAFVGQNSLKRHERIHTGEKPYECNECG
                     KAFVGQSNLKGHERIHGGEKPYECNECGKGFVCNDRLQTHKAIHTGVKP"
ORIGIN      
        1 caactgatcc tacctactcc tgttcccatc aaactctggt ctactcacag aaattattct
       61 atttcccctg tagaaagaga tctgtgcttc ctgcctagag cctacctctt taactaaccc
      121 ctctgggttg gattattatt tacctaatag gtaatatcca cttgtaagta aatgcatgcc
      181 atgtttgtca ttctgggtgt gatttcttta gttgcattta cttgcctgta aattcatgat
      241 ggcatctttt taaacagctg agtgatactc cattttataa atgtaccaca tgttttgttt
      301 accctgtaag gtcaaagtta gtcttaacta ccaggagatt cccccaagta aggcatgaga
      361 atggagttta atgcaaagga tgcattgacc tatgatgatg tacatgtgaa cttcactcga
      421 gaagaatggg ctttgctgga tccttcacag aagagtctct acaaagatgt gatgcaggag
      481 acctacagga acctcactgc tataggttac aattgggaag accatagtat tgaagaacat
      541 tgtcaaagtt tcagaagaca tggaaggcat gaaagatgtc atactggaga gaaaccatct
      601 gaaaatactc agtgtggtaa agcctttgca caacatagtc gtctccaaag acataaaaac
      661 acacatactg gagagaaact ctgtgaatgt aagccacatg ataaagcctt tacatacgat
      721 tctcagcttc aaactcttga aaggattcat agtggagaaa aaccctacaa atataatcaa
      781 tgtggtaaag cctttgaacg tcgttgtaat cttggaaggc ataaactaat acatactgga
      841 agaaaatcct acaaatgcaa tcagtgtggt aaagcctttt cacaaaacag tcatctccaa
      901 acacataaaa gcacacatac tagagaggaa ctctataaat gtaagcaatg cggtaaagcc
      961 tttacatgcc ataatgaact tcaaagtcat aaaaggattc atactggaga gaaatcctac
     1021 gaatgcaatc agtgtggtaa agcctttaaa tctcataggt atctccaagt acataaagca
     1081 atacatactg gagagaagcc ctatgtatgt gatcaatgtg gtaaagcctt tgcacgactc
     1141 agtcatctca aaacgcatgg aataacacat agtggaaaga agccttgtaa gtgtgatcaa
     1201 tgtggtaaag cctttgcatc tcatagttat ctccaagtac ataaaagaat acatactgga
     1261 gagaagccct atgtatgtga tcggtgtggt aaagcctttg catctcatag ttatctccaa
     1321 gtacataaaa gaatacatac tggagagaag ccctatgtat gtgattggtg tggtaaagcc
     1381 tttgcatctc atagttatct ccaagtacat aaaagaatac atactggaga gaagccctat
     1441 gtatgtgatc ggtgtgataa agcctttgca tatcatagtt atctccaagt acataaaaga
     1501 atacatactg gagagaagct ctatgaatgt gatcaatgtg gtaaagcctt tgcatctcat
     1561 agttatctcc aagtacataa aaaaatacat actggagaga agccctatgt atgtgatcaa
     1621 tgtggtaaag actttgtagt tcagagtgat cttaaaagac ataaaagaac acatactgga
     1681 gagaaacctt acaaatgtaa tgaatgtggt aaggcctttg taggtcagaa tgatcttaaa
     1741 aaacataaaa gaaaacatac tggcgagaaa ccttatgaat ataatgaatg tggtaaagcc
     1801 tttgtaggtc agaatagcct taaaaggcat gaaagaattc atactggaga gaaaccttat
     1861 gaatgtaatg aatgtggtaa agcctttgta ggtcagagta accttaaagg gcatgaaaga
     1921 attcatggtg gagagaaacc ttatgaatgt aatgaatgtg gtaaaggctt tgtatgtaac
     1981 gatagactcc aaacacataa agcaatacat actggagtga aaccttaaga atgtaagcaa
     2041 tatggtaaag cctttgtagg tcagaatgac cttaaaaggc atgaaagaat tcatactgga
     2101 gagaaacctt acaaatgtaa tgaatgtggt aaagcctttg tatgtaatgc tagtctccga
     2161 aaaca
//
