LOCUS       XM_039098264            1536 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal type-2 receptor 116-like
            (LOC103690913), mRNA.
ACCESSION   XM_039098264
VERSION     XM_039098264.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098264.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1536
                     /gene="LOC103690913"
                     /note="vomeronasal type-2 receptor 116-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins, and 21% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:103690913"
                     /db_xref="RGD:9095272"
     CDS             1..1536
                     /gene="LOC103690913"
                     /codon_start=1
                     /product="vomeronasal type-2 receptor 116-like"
                     /protein_id="XP_038954192.1"
                     /db_xref="GeneID:103690913"
                     /db_xref="RGD:9095272"
                     /translation="MKKLCAFTIAFFPLKFCLILCSLTEPNCFWRIKKIEVYDGDLQN
                     DCGFVLFTLESPIEENFYNHIINFRIPARKYEFFLVMFFATDEINKNPYLLSNMSLIF
                     SFIFGMCEDTMGVLDKAYLHQNNYFDLLNYNCGRKKRCDVKLTGPSWKTSLKLSVNSR
                     APKIFFGPFNPNLSDHDQFPYIYQIATKDTYLLHGMVSLMFHFEWTWIGLIITDDDQG
                     IQFHSDLREEMQRHAICLAFVIMIPESIKLYNTKFKIYDQQLMTSSAKVTIIYGKMIS
                     TLELNFARWTYLVARRIWITTSKLDVITYDKDFSLDFFHGTVIFAHHHNDIATFRNFM
                     QIINTSKYPVDISQSMGQWNHFNCSISKNKKKMDFFMLKNPMEWLTQHTFDMVLSEEG
                     YNLYNAVYAVAHTYHELIFQQVESQEMAKPKGLFTDCQQVASLLKTRVFTNPVGELVN
                     MNHKENQCAKYDIFIIWNFPNGLGLKVKIGSYFPCLQQSQHLHISEDWEWVTGETLKY
                     DMS"
ORIGIN      
        1 atgaagaagc tgtgtgcttt cactattgcc ttttttcctc tgaagttttg tctcatcttg
       61 tgcagtttga ctgaacccaa ttgcttttgg aggataaaaa agatcgaagt ttatgatgga
      121 gatttgcaaa atgactgtgg ttttgtcctt tttacacttg agagccctat tgaagaaaat
      181 ttttataatc acattattaa ttttaggata ccagcaagaa aatatgaatt ttttctggta
      241 atgttttttg ctactgatga gatcaacaag aatccttatc ttttatccaa catgtctttg
      301 atattttcct tcatttttgg tatgtgtgaa gatacaatgg gagttctgga taaagcatat
      361 ttacatcaaa acaactattt cgatctactt aattataact gtggaagaaa gaaacgttgt
      421 gatgtaaaac ttacaggacc atcatggaaa acttccttaa aactttcagt taattcaagg
      481 gcaccaaaga ttttctttgg accatttaat cctaacctga gtgaccatga ccagtttccc
      541 tatatctatc agatagcaac caaggacaca tatttgctcc atggcatggt ctccttgatg
      601 tttcattttg aatggacttg gataggactg atcatcacag atgatgacca aggtattcag
      661 tttcactcag acttgagaga agaaatgcaa aggcatgcga tctgtttagc ttttgtgatt
      721 atgatcccag aaagcattaa gttatacaac acaaagttta agatatatga ccaacaactt
      781 atgacatctt ctgcaaaggt tactatcatt tatggcaaaa tgatctccac tctagaactc
      841 aactttgcaa gatggacata tttagttgca cggagaatct ggatcacaac ctcaaaattg
      901 gatgtcatca catatgataa agatttcagc cttgatttct tccacgggac tgtcattttt
      961 gcccaccacc acaatgacat cgctacattt agaaatttta tgcaaataat aaacacatcc
     1021 aagtatccag tagatatttc tcagtctatg gggcagtgga atcattttaa ctgttcaatc
     1081 tcaaagaaca agaagaaaat ggattttttt atgttgaaaa acccaatgga atggttaaca
     1141 cagcacacat ttgacatggt cctgagtgaa gaaggttaca atttgtataa tgctgtgtat
     1201 gctgtggccc acacctatca cgaactcatt tttcaacaag tagagtctca ggaaatggcc
     1261 aaacccaaag gactattcac tgactgtcag caggtggctt ctttgcttaa aactagggta
     1321 tttactaacc ctgttggaga gctggtgaac atgaatcata aggaaaatca gtgtgccaag
     1381 tatgacattt tcatcatttg gaattttcca aatggccttg gattaaaagt gaaaatagga
     1441 agctattttc cttgtttgca acagagtcaa catcttcata tatctgaaga ctgggagtgg
     1501 gttacaggag aaacattgaa atatgatatg tcctag
//
