LOCUS       XM_039084938            3341 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC103690912
            (LOC103690912), transcript variant X1, mRNA.
ACCESSION   XM_039084938
VERSION     XM_039084938.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084938.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3341
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3341
                     /gene="LOC103690912"
                     /note="uncharacterized LOC103690912; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6 long
                     SRA reads, 13 Proteins, and 92% coverage of the annotated
                     genomic feature by RNAseq alignments, including 140
                     samples with support for all annotated introns"
                     /db_xref="GeneID:103690912"
                     /db_xref="RGD:9294106"
     CDS             322..2070
                     /gene="LOC103690912"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038940866.1"
                     /db_xref="GeneID:103690912"
                     /db_xref="RGD:9294106"
                     /translation="MDALTYDDVHVNFTREEWGLLDPSQKSLYKDVMQETYRNLTAIG
                     YNWEDHTIEEHCQSFRRHGRHERCHTGEKPSENTQCGKAFAQHSHLQRHKSTHTGEKL
                     YECKPRDKAFTYDSQLQNLERIHTGEKPYKCNQCGKGFIRCSHLQVHKRIHTGEKPYV
                     CDRCGKAFAYHSYLQVHKRIHTGEKPYECNQCGKAFGLHSTLKTHERIHTGEKPYKCN
                     QCGKAFARPSHLQRHGITHTGEKPYECEQCGKAFIRCSHLQVHKRGHTGEKPYECNQC
                     GKAFVLHSTLKTHERIHTGEKPYKCNQCGKAFARPSHLQRHGITHTGEKSYECELCGK
                     AFISCSSLQVHKRIHTGEKPYECDQCGKAFIRCSHLQVHKRGHTGEKPYECNQCGKAF
                     VLHNALKRHERIHTGEKPYKCNQCGKAFARTTHLKRHGITHTGEKTYECDQCGKAFTS
                     HSYLQVHKRIHTGEKLYECDQCGKAFAYQSYLQVHKRIHTGEKPYVCDQCGKAFAYQS
                     YLQVHKRIHTGEKLYECDQCGKAFTSHSYLQVHKRIHTGEKPYKCNECGKAFVCNASL
                     RKHKATHTTVKPYECK"
ORIGIN      
        1 gaggacaggc tactgaaatg caaatccctg tagatccgga aaagatctgg ctctggaatt
       61 gaagcttggg ctgagaactg tgtatgctga ctgtatcttc agctcactct aactcttacc
      121 gaggtgctaa agtcactcaa gactactggc caatcagagt tcactggacc tgccaatcag
      181 aagagaaggc gggcttttcc gggtgccttg ttgcaggatt cccttagtag ctaagcagtt
      241 ttaaatggtc ctggctgttt tgctctttgt cctgcctttg gattctgtga ggcatgctca
      301 ggcaagctcc aaagttgcga catggatgca ttgacctatg atgatgtaca tgtaaacttc
      361 actcgagaag aatggggttt gctggatcct tcacagaaga gtctctacaa agatgtgatg
      421 caggagacct acaggaatct cactgctata ggttacaatt gggaagacca tactattgaa
      481 gaacattgtc aaagtttcag aagacatgga aggcatgaaa gatgtcatac tggagagaaa
      541 ccctctgaaa atactcagtg tggtaaagcc tttgcacaac atagtcatct ccaaagacat
      601 aaaagtacac atactggaga gaaactctat gaatgtaagc cacgtgataa agcctttaca
      661 tacgattctc agcttcaaaa tcttgaaaga attcatactg gagaaaaacc ctacaaatgt
      721 aatcaatgtg gtaaaggctt tatacgttgt agtcatctcc aagtacataa aagaatacat
      781 actggagaga agccttatgt atgtgatcgg tgtggtaaag cctttgcata tcatagttat
      841 ctccaagtac ataaaagaat acatactgga gagaagccct atgaatgtaa tcaatgtggt
      901 aaagcctttg gacttcacag tactcttaaa acacatgaaa gaattcatac tggagagaaa
      961 ccctacaaat gcaatcaatg tggtaaagcc tttgcacgac ccagtcatct ccaaaggcat
     1021 ggaataacac atactggaga gaaaccttac gaatgtgaac aatgtggtaa agcctttata
     1081 cgttgtagtc atctccaagt acataaaaga ggacatactg gagagaagcc ctatgaatgt
     1141 aatcaatgtg gtaaagcctt tgtacttcac agtactctta aaacacatga aagaattcat
     1201 actggagaga aaccctacaa atgcaatcaa tgtggtaaag cctttgcacg acccagtcat
     1261 ctccaaaggc atggaataac acatactgga gagaaatctt acgaatgtga actatgtggt
     1321 aaagccttta taagttgtag ttctctccaa gtacataaaa gaatacatac tggagagaaa
     1381 ccctatgaat gtgatcaatg tggtaaagcc tttatacgtt gtagtcatct ccaagtacat
     1441 aaaagaggac atactggaga gaagccctat gaatgtaatc aatgtggtaa agcctttgta
     1501 cttcacaatg ctcttaaaag acatgaaaga attcataccg gagagaaacc ctacaaatgc
     1561 aatcagtgtg gtaaagcctt tgcacgaacc actcatctca aaaggcatgg aataacacac
     1621 actggagaga aaacttacga atgtgatcaa tgtggtaaag cctttacatc tcatagttat
     1681 ctccaagtac ataaaagaat acatactgga gagaagctct atgaatgtga tcaatgtggt
     1741 aaagcctttg catatcaaag ttatctccaa gtacataaaa gaatacatac tggagagaag
     1801 ccctatgtat gtgatcaatg tggtaaagcc tttgcatatc aaagttatct ccaagtacat
     1861 aaaagaatac atactggaga gaagctctat gaatgtgatc aatgtggtaa agcctttaca
     1921 tctcatagtt atctccaagt acataaaaga attcatactg gagagaaacc ttacaaatgt
     1981 aatgaatgtg gtaaagcctt tgtatgtaat gctagtctcc gaaaacataa agcaacacat
     2041 actacagtga aaccttatga atgtaagtaa tttagtaaat tctttgcctc tcatgatcaa
     2101 ctttgacaac atgaaagaat tcataccgga aagaaacctt acgaatgtag tcagtatggt
     2161 aaagcatttt cacaatcaag ccacctccaa ctacataaaa gaacacatac atactaaaga
     2221 gtaaccctat gaatgtaacc aatgtagtaa agcctttact gtgatcttca aagttatggt
     2281 ggttaaaata tacttggccc ttggcaagtg gcagtgttag gaggtatggc ctttttggag
     2341 tagatgtggc ctttgaggat gtatgtcact gtggaggggg catgggcttt cagaccccat
     2401 gcttaaactc tgcccagggc agaagagtct tctggctgcc ttctgatcaa gatgtagaac
     2461 tctctcctcc agcaccatgt ctgcttggac actgacattc cttccacctt gataatagac
     2521 tgaacctctg aatctgtata cctctcctcc ccacaattaa atgtccttcc taagagttgc
     2581 cttggtcatg gtatcttttc acagcattaa aacccaaatt aacacaaaca gcataaaaga
     2641 taccacacta gggagaaact atgaatgtac tgaatatggt gaagcctttg cacatttcta
     2701 tatctcctta taacaaaagt attcctgaaa ccctgtgaat gcagaaaata acattcttga
     2761 gaaaagcctt ataaatgggc tcaatgtggt aaagtgtttg tgttctgaaa tctgcataaa
     2821 tacctaacaa ttcaaaaaca tggtcaaagt aaatgccagg attctattgg aaaccagctg
     2881 agttagaagg gtagggatta tgaatagggt ggttgggtgt gcagttagtg ctagaaagtt
     2941 aggggttagg gttaaagggt tgggggggcg gtgtgggtta gagttaggga gtgggtgggt
     3001 agggttaggt tgggggtgtt tagggttagg gggttaggaa aaagtgaatt tggggaagga
     3061 aatgggacga tgttgattgt gggacagaga gggatgaaaa tgatatatag tattcataaa
     3121 atcctcaaat acaaaaataa tcaagttgaa cagcttcaac gtaaatagat tggggggtaa
     3181 ggagagttgt tactacatac attaatgaaa ttcagaaaaa tcattaggtc ttattttaga
     3241 aatcacttat ttcaataaag tggaaaactc taaaataaag tatatagatt tctggatgta
     3301 tataacctac caaaagtaaa tcgtgaagat ctaaaaaaaa a
//
