LOCUS       XM_039100408             461 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L35a pseudogene
            (LOC103690851), mRNA.
ACCESSION   XM_039100408
VERSION     XM_039100408.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100408.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..461
                     /gene="LOC103690851"
                     /note="60S ribosomal protein L35a pseudogene; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 12 Proteins, and 87% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:103690851"
                     /db_xref="RGD:9094000"
     CDS             4..270
                     /gene="LOC103690851"
                     /codon_start=1
                     /product="60S ribosomal protein L35a-like"
                     /protein_id="XP_038956336.1"
                     /db_xref="GeneID:103690851"
                     /db_xref="RGD:9094000"
                     /translation="MSGRLWCKAIFAGYKRGLRNQREHTALLKIEGVYARNETEFYLG
                     KQCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNGGMVHAKI"
ORIGIN      
        1 agtatgtctg gaaggctgtg gtgcaaggcc atttttgctg gctacaagcg aggcctccgg
       61 aaccaaagag agcacacggc tcttcttaaa attgaaggcg tttatgcccg aaatgaaact
      121 gagttctact taggcaagca gtgtgcttat gtgtacaaag caaaaaacaa tacagtgact
      181 cctggaggca aaccaaacaa aaccagagtg atctggggaa aagtaacccg ggcgcatgga
      241 aacggtggca tggttcatgc caaaatctga agcaaccttc ctgcaaaggc cattggacac
      301 agaatcatga tgctgtaccc atcctggatt tcaactaata gagaataaat aaatatagat
      361 ttgtgctctg gtaaaaaaaa aaaaaaaaga aaagaaaaga aacacaacaa aggctagagt
      421 gatggctcag tagttgaaag cactgactgc tgttccagag g
//
