LOCUS       XM_039100279             644 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L9-like
            (LOC103690796), mRNA.
ACCESSION   XM_039100279
VERSION     XM_039100279.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100279.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..644
                     /gene="LOC103690796"
                     /note="60S ribosomal protein L9-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2 long
                     SRA reads, 16 Proteins, and 95% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:103690796"
                     /db_xref="RGD:9453398"
     CDS             1..582
                     /gene="LOC103690796"
                     /codon_start=1
                     /product="60S ribosomal protein L9-like"
                     /protein_id="XP_038956207.1"
                     /db_xref="GeneID:103690796"
                     /db_xref="RGD:9453398"
                     /translation="MKTTILSNETVDIPENVDITLKGCTVIVRDPRGTLRRDFNHINV
                     ELSLLGKKKKRLCVDKWWGNSKELATVRTICSHVQNMIKGVTLGFCYEMRSVDAHFPI
                     NVIIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAA
                     LIQQATTVKNKDIRKFLDGIYVSEKGTVQQPDE"
ORIGIN      
        1 atgaagacca ccattctcag caatgagact gtcgacattc cagaaaatgt cgacatcact
       61 ctgaaggggt gcacagtcat tgtgagggac cccagaggaa ctctgcggag ggacttcaat
      121 cacatcaatg tagagctgag tcttcttgga aagaaaaaga aaaggctctg tgttgacaag
      181 tggtggggta acagtaagga actggccact gtcagaacca tctgcagtca cgttcagaac
      241 atgatcaagg gtgtgacact gggcttctgt tacgagatga ggtctgtgga tgctcacttc
      301 cctatcaacg tcattattca ggagaatggg tctctggttg aaatccgaaa tttcttgggt
      361 gaaaaataca tccggagggt tcggatgagg acaggtgttg cttgttctgt ctctcaagcc
      421 cagaaggatg agttaatcct tgaaggaaat gatattgaac ttgtttcaaa ttcagcggct
      481 ctgattcagc aagccacaac agttaaaaac aaggatatca ggaagttttt ggatggcatc
      541 tatgtttctg agaagggaac cgtgcagcag cctgacgaat gagacctcag tttcctagct
      601 tcagaaacaa gatcctgatc acaagtacag tttgggctct gtgg
//
