LOCUS       XM_039098131            2756 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 431-like
            (LOC103690393), transcript variant X1, mRNA.
ACCESSION   XM_039098131
VERSION     XM_039098131.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098131.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2756
                     /gene="LOC103690393"
                     /note="zinc finger protein 431-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 75 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:103690393"
                     /db_xref="RGD:9375264"
     CDS             368..2434
                     /gene="LOC103690393"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038954059.1"
                     /db_xref="GeneID:103690393"
                     /db_xref="RGD:9375264"
                     /translation="MDTLTYDDVHVNFTREEWTLLDPSQKSLYKDVMLETYRNLTAIG
                     YNWEDHPIEEHCQSFRRHGRHERSRTGEEPSENTQCGKAFAYHSYPQRHEKNHTGEKP
                     YEGIEYGEAFVHHSSLQMHKMIHTGEKPYRCNQCGKAFAQHSHLQRHKSAHTGEKLYE
                     CKPHDKALTYHSQLQNLEKIHTGEKPYQCNQCGKAFAHRRNLGMHKIIHTGKKPYKCN
                     QCGKAFARHSHLKMHRITHTGEKPYKCNQCGKAFAYHSYLQVHKRSHTGEKPYVCDQC
                     GKAFAYHSYFQVHKRTHTGEKPYECKQCSKSFASHGQLQSHGRIHNGEKPYKCNQCDK
                     AFAHHCNLRMHKMMHTGEKPYKCIQCDKAYSRYSNLQIHKSTHTREKLYECKQCGKVF
                     TYHCELQSHKRIHTGEKSYKCNQCGKAFTLQCNLRMHKMIHTGEKPYKCNQCGKAFAR
                     HSTLQIHKSTHTGEKPYECNQCGKAFASHSYLQVHKRKHTGEKPYGCNQCGKAFAQQG
                     HLQMHIITHTGQKPYRCDQCGKAFAYNNTLQVHKRTHTGEKPYECDQCGKAFAHRCHL
                     QVHKRIHTGEKPYECNQCGKAFVGQNDLKRHERIHTGEKPYRCNECGKAFVCNASLQI
                     HKATHTGLKPYECKQCCKAFASHGQLQKHERIHTGEKPYKCSQCGKAFSQSSHLQLHK
                     RTHIKE"
ORIGIN      
        1 tggggctggg cggggagaca gatgagaacg ctattggagg acaggcacaa gtgctactga
       61 aatgcaaatc cctgtagatc tggaaaagat ctggccctgg gcttgaagct tggacccgga
      121 actgtgtacc tacactgtac cttcagctca ctctaacgct cacggaggtg ttcaagtcac
      181 tcaagactac tggccaatca gagccttcaa cggacctgct aatcagaaga gaaggcgggc
      241 ttttccgggt gccatggtgc aggattcgct tagtagctga gcagtcttaa atggttctgt
      301 gtgctgtgct gtctgtcctg ccgctggatt ctgtaaggct tgctcagaca agctccaaag
      361 tcgcgacatg gatacactga cctatgatga cgtacatgtg aacttcactc gagaagaatg
      421 gactttgctg gatccttcgc agaagagtct ctacaaagat gtgatgctgg agacctacag
      481 gaacctcact gctataggtt acaattggga agaccatcct attgaagaac attgtcaaag
      541 tttcagaaga catggaaggc atgaaagaag tcgtactgga gaggaaccct ctgaaaatac
      601 tcagtgtggt aaagcctttg catatcacag ttatcctcaa aggcatgaaa aaaatcatac
      661 tggagagaaa ccctatgaag gtattgagta tggtgaagcc tttgtacatc acagtagtct
      721 ccaaatgcat aaaatgatac atactggaga gaaaccctac agatgcaatc aatgtggtaa
      781 agcctttgca caacacagtc atctccaaag acataaaagt gcacatactg gagagaaact
      841 ctatgaatgt aagccacatg ataaagccct tacataccat tctcaacttc aaaatcttga
      901 aaaaattcat actggagaaa aaccttacca atgtaaccaa tgtggtaaag cctttgcaca
      961 tcgtcgtaat cttggaatgc ataaaataat acatactgga aagaaaccct acaaatgcaa
     1021 tcagtgtggt aaagcctttg cacgacacag tcatctcaaa atgcacagaa taacacatac
     1081 tggagaaaaa ccttacaaat gtaatcaatg tggtaaagcc tttgcatatc atagttatct
     1141 ccaagtacat aaaagaagtc atactggaga gaagccctat gtatgtgatc aatgtggtaa
     1201 agcctttgca tatcatagtt atttccaagt acataaaaga acacatactg gagagaaacc
     1261 ctatgaatgt aagcaatgca gtaaatcctt tgcctctcat ggtcaacttc aaagtcatgg
     1321 aagaattcat aatggagaaa aaccctacaa atgtaaccaa tgtgataaag cctttgcaca
     1381 tcattgtaat cttcgaatgc ataaaatgat gcatactgga gagaaaccct acaaatgcat
     1441 tcaatgtgat aaagcctatt cacgatacag taatctccaa atacataaaa gcacacatac
     1501 tagagagaaa ctctatgaat gtaagcaatg tggtaaagtc tttacatacc attgtgaact
     1561 tcaaagtcat aaaagaattc atactggaga gaaatcctac aaatgtaacc aatgtggtaa
     1621 agcctttaca cttcaatgta atcttcgaat gcataaaatg atacatactg gagagaaacc
     1681 ctacaaatgc aatcagtgtg gtaaagcctt tgcacgacac agtactctcc aaattcataa
     1741 aagcacacac actggagaga aaccctatga atgtaatcaa tgtggtaaag cctttgcatc
     1801 tcatagttat ctccaagtac ataaaagaaa acatactggt gagaaaccct atggatgtaa
     1861 tcagtgtggt aaagcctttg cacaacaggg tcatctccaa atgcatataa taacacatac
     1921 tggacagaaa ccttacagat gtgatcaatg tggtaaagcc tttgcatata ataatactct
     1981 ccaagtacat aaaagaactc atactggtga gaaaccctat gaatgtgatc agtgtggcaa
     2041 ggcctttgca catcgttgtc atctccaagt acataaaaga atacatactg gagagaaacc
     2101 ctatgaatgt aatcaatgtg gtaaagcctt tgtaggtcag aatgatctta aaagacatga
     2161 aagaattcat actggagaaa aaccttacag atgtaatgaa tgtggtaaag cctttgtatg
     2221 taatgctagt ctccaaatac ataaagcaac acatactgga ctgaaaccgt atgaatgtaa
     2281 gcaatgttgt aaagcctttg cctctcatgg tcaacttcaa aaacatgaaa gaattcatac
     2341 tggagagaaa ccttacaaat gtagtcaatg tggtaaagcc ttttcacaat caagccacct
     2401 ccaactacac aaaagaacac atattaaaga gtaactgtat gaatgtaacc attgtggtaa
     2461 agcctttact gtgatattca aaggtgtggt aatttaaata tacttggccc atggcaagtg
     2521 gcagtgttag gaggtatggc ctttctgggg tagatgtggc ctttgaggaa gtatgtcact
     2581 gtgggcggtg ggctttgaga tcctatgctt aggctcttcc cagggtggaa gagtcttctg
     2641 gctgccttct gaccaagatg tagaactctc cagcaccatg tctgcttgga cactgccctt
     2701 ctttctgcct tgataataga ctgaacctct gaatctgtat accaccccca attaaa
//
