LOCUS       NM_001409012             467 bp    mRNA    linear   ROD 26-APR-2024
DEFINITION  Rattus norvegicus histone cluster 1 H2A family like 1 (Hist1h2al1),
            mRNA.
ACCESSION   NM_001409012 XM_008771771
VERSION     NM_001409012.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Singh,R., Mortazavi,A., Telu,K.H., Nagarajan,P., Lucas,D.M.,
            Thomas-Ahner,J.M., Clinton,S.K., Byrd,J.C., Freitas,M.A. and
            Parthun,M.R.
  TITLE     Increasing the complexity of chromatin: functionally distinct roles
            for replication-dependent histone H2A isoforms in cell
            proliferation and carcinogenesis
  JOURNAL   Nucleic Acids Res 41 (20), 9284-9295 (2013)
   PUBMED   23956221
REFERENCE   2  (bases 1 to 467)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   3  (bases 1 to 467)
  AUTHORS   Bonenfant,D., Coulot,M., Towbin,H., Schindler,P. and van Oostrum,J.
  TITLE     Characterization of histone H2A and H2B variants and their
            post-translational modifications by mass spectrometry
  JOURNAL   Mol Cell Proteomics 5 (3), 541-552 (2006)
   PUBMED   16319397
REFERENCE   4  (bases 1 to 467)
  AUTHORS   Boyne,M.T. 2nd, Pesavento,J.J., Mizzen,C.A. and Kelleher,N.L.
  TITLE     Precise characterization of human histones in the H2A gene family
            by top down mass spectrometry
  JOURNAL   J Proteome Res 5 (2), 248-253 (2006)
   PUBMED   16457589
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Jul 6, 2022 this sequence version replaced XM_008771771.3.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360172.523153.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-467               JAXUCZ010000017.1  47403701-47404167   c
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..467
                     /gene="Hist1h2al1"
                     /note="histone cluster 1 H2A family like 1"
                     /db_xref="GeneID:103690190"
                     /db_xref="RGD:9087157"
     exon            1..467
                     /gene="Hist1h2al1"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..418
                     /gene="Hist1h2al1"
                     /codon_start=1
                     /product="histone H2A type 1-E"
                     /protein_id="NP_001395941.1"
                     /db_xref="GeneID:103690190"
                     /db_xref="RGD:9087157"
                     /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERV
                     GAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVT
                     IAQGGVLPNIQAVLLPKKTESHHKAKGK"
ORIGIN      
        1 tagttgtgac aacttgctgt ttgtcatgtc tggacgcggc aagcagggcg gcaaggctcg
       61 cgccaaggcg aagacgcgct cttcccgagc tggcctgcag ttccccgtgg gccgcgtgca
      121 ccggctgctt cgcaagggca actacgcgga gcgggtggga gccggcgccc cggtgtacct
      181 ggcggccgtg ctggagtacc tgacggccga gatcttggag ctcgcaggca acgcggcgag
      241 ggacaacaaa aagacacgca tcattccgcg tcacctgcag ctggccatcc gcaacgacga
      301 ggagctcaac aagctgctgg gccgcgtgac tattgcgcag ggtggcgtcc tgcccaacat
      361 ccaagccgtg ctgctgccca agaagaccga gagccaccac aaggccaagg ggaaataaga
      421 ccagccgttc actcatccag aaccaaaggc tcttttcaga gccatcc
//
