LOCUS       XM_017597808            3501 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus pulmonary surfactant-associated
            protein D-like (LOC102557607), partial mRNA.
ACCESSION   XM_017597808
VERSION     XM_017597808.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017597808.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..3501
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..>3501
                     /gene="LOC102557607"
                     /note="pulmonary surfactant-associated protein D-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 103
                     samples with support for all annotated introns"
                     /db_xref="GeneID:102557607"
                     /db_xref="RGD:7539176"
     CDS             2665..>3501
                     /gene="LOC102557607"
                     /codon_start=1
                     /product="translation initiation factor IF-2-like"
                     /protein_id="XP_017453297.2"
                     /db_xref="GeneID:102557607"
                     /db_xref="RGD:7539176"
                     /translation="MSPCVCMVSSVCAVPEQGPLKASVVGRRRVGWRGAGAAPEGEVS
                     VPATCRLVPARFQRAPSPGRRGRRGPAPAVLPLSARAGRPLGASGPRARGSGGWAGTP
                     GPRLPRGGPRTSPAGRRAAESRTSRPAPEARPGARCGRDGGRARGSPQAALVGSAVWR
                     VERAGVGGWRWERAVGVDCSAPEPRCLWLPCLSHSDRRAPGLRPARLPLGSRDGCSSG
                     RPLPWQGPRTLLLHKNLQDGFGFTLRHFIVYPPESAVHCSLKEEENGSRGGQGGQGGG
                     RGG"
ORIGIN      
        1 tccggaaaaa aaaaaaaaga aaaaaaagaa aggtggaggc aggagttcaa agtcatcctc
       61 agcctcacag agagagactt taaggccagc cttgaaatca tgtctctaaa caaacaaata
      121 cattcatact aagaaccctc tctgactgta catgcctgta atctcaacac tcaggaggct
      181 gagacagagg agttactgtg agttcaaggc cagcctaggt tgtaaacaga attcagtgcc
      241 accagcatca catagtaaga tcctgcctct gctccccacc agcgtcccag aaaggccctg
      301 gtggatatcc agtgcttagg gaacggtcac aagtaccagt actttttaga attctgggcg
      361 tcctttctta ggggttcagt tgtgagcagg gacccttagg aaggtaagta ccagctgtcc
      421 actcgggggc gggaggggct ggccagcggg tgattccgca gtggggagga agcagcaggc
      481 agggtgtggg ggaggacact gcgcaggaag gcttggaata gaaatctcag caacgcctgg
      541 tatttcccag gcttgcccct ccccctcagg ctctggggcc caccccacat tcctttccca
      601 gaggaaactg gagggagcaa gctccccaga cccagaagat catttcaagc tgtggcctcc
      661 ctttgaggcc ctactgtgta tgctacacag gccctccccc acttgtcttc cctctctctg
      721 agtttctgct gaggcagcct tcttcgaatc tgcccagtta aaagacagaa agtggacatt
      781 ggaaattctg gtcttcaagg tctctgtaag cctgaacata atgtcacatg cctctgccct
      841 cccctacagc acccagacac cttcatgtct catcagacac gcaatcatgg tcagccatga
      901 gaggcctaac gataagacct gggcttgtat caagataaaa aggcagttgg gggctgggga
      961 gatgtctctc agggaaaggt gctagctata caagttcaat gcctgggttc aaccctcaga
     1021 acctatgtag aagccacagg cagaatgcaa agaggttttc ctttgacctt gtaggaagtg
     1081 gcatgtgtac cctcatgcac atatacacat aaatacttaa ggaggaggaa gagggggagg
     1141 aggaagaggg ggaagaggaa gaagaggaga aggagaagga agaagaggag gaggaggagg
     1201 agggggagga ggaggaagtg gtgcctgaca tagtggcaga ggcaggcaga tctctctgag
     1261 tttcagggct atcttggtct atgcctcaag tttcaggaca gccacagcta cataaggtgg
     1321 ccgttaggca gttgggagga cttagtgggg gcctgatgag ggagccaagg acaaccctgt
     1381 gcctgtgcat tctactttgg gccccaaagt ccacatggct caggacatct tggtgggatg
     1441 gccacctggt ctctgatctg gtgtttggga ggatctgata aggaggggca gagtaggagg
     1501 tggtcagatc cagaagtttg gttttctagt tttccagctg ctgggagaaa tgtagactcg
     1561 gtttcactgt ccctggctgc cccgctgtcc ctgactggtc ctttcctgct ctccccagtc
     1621 ctgactcagc tcatggcagt ctcagctctt cccgttgggc ttccgcaggg tggaggtggg
     1681 ggtccagctc ctgcatgggc cccacaagca gcaaacagga aacaggagaa caaaaccgct
     1741 ccctggctga ctctgtcccc accaccctgg gcctcacccc cacccttcct cctctgttgt
     1801 tccttctctc catcctgccc acccacttat acttgtattc ctttctggat ctagtacctc
     1861 tcacataggt caccttcctg gggagtgaag acaggggctt tgccagtgtt cccaaccagc
     1921 ccagccttgt ggctctccct ctcagatggg ctctgcgttt gtgtcccctt ctgctgagta
     1981 tttcctcctt ggtgcctaaa cttttctaaa tgcctccatg aactcagggt aggatgacag
     2041 tggagaacac acagcctggg gctattgcta gtcctgcttc tacttgggga aaggatgggg
     2101 ccctgagagc cagaaaaggg ggtgggtggg taatgtctag agtcaaccag cacccatctc
     2161 attgccatta tagtgtggag ggagtgatca gcttggagcc tcctgttgct tggtgatgcc
     2221 agggttcctg gaagtttcgt ggggaagagg aatggactgg acgtcctctg ggaggctgga
     2281 gtggggtcac tttgacacac ctcatgctct cattctgggt gggcagtgtg tgccacctga
     2341 agagcacaga gtcctgaggc aagcatgtgc tgcgcagtgt gtgattgtca ccatcccgct
     2401 tgtatgtggt caagtgggca tctggggggg aggtgtctgt aaaggactgg gatactttaa
     2461 atggccgtgt ttgcatatat gtctcatgga gaggaatgaa tgggagaata ttcatagatg
     2521 tgagcaatga gatccacact gagggtctgt ctgcgaaggg tctgtggggg acagatgatg
     2581 gtcatgtatg tgaggcacac agctagaaca tgtttctgca ggagtgtaaa gttaatgggc
     2641 cccatagtgt gatcggtcga cagaatgagt ccctgtgttt gtatggtgtc gtcggtgtgt
     2701 gctgtgcctg agcagggacc gctcaaagcc tctgtcgtgg ggcggaggag ggtgggctgg
     2761 cgcggcgcag gggccgcccc ggagggggag gtgtctgtcc cagcgacttg taggcttgtc
     2821 cctgcccggt tccagcgggc gccttcaccc gggcggcgcg ggaggcgcgg ccccgctcca
     2881 gccgtcctgc cgctgtccgc gcgggctggc cgccccctcg gggcctctgg gccgcgggcc
     2941 cgcggctctg gggggtgggc tgggacccct gggccccgcc tgccgcgcgg gggtccgaga
     3001 acgtcccccg ctgggcgccg agccgcggag tcccgcacct cacgtcccgc tccggaagcc
     3061 aggcccggtg cgcgctgcgg ccgcgacggt ggccgcgctc gggggtcccc tcaagctgcg
     3121 ctggtgggca gtgccgtgtg gcgcgtggag cgcgcgggcg tcgggggctg gcgctgggaa
     3181 cgcgccgtcg gcgtggactg cagcgcccca gagccacgct gtctctggct gccctgtctg
     3241 agccacagcg accgccgcgc gcccgggctg cgtccggcca ggcttccact gggctctcga
     3301 gatgggtgct cttctgggcg ccccctcccc tggcaggggc cgaggacact gctgctgcac
     3361 aagaatcttc aggatggctt tggtttcacc ctgcgccact tcattgtgta cccacctgag
     3421 tcagccgtgc actgcagcct gaaggaggaa gagaatggaa gccgaggagg ccaaggaggc
     3481 caaggaggag gaagaggagg a
//
