LOCUS       NM_001329892            2175 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus carcinoembryonic antigen-related cell adhesion
            molecule 3-like (LOC102557319), mRNA.
ACCESSION   NM_001329892 XM_006223102 XM_008759035
VERSION     NM_001329892.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097327.1.
            
            On or before Aug 4, 2016 this sequence version replaced
            XM_008759035.1, XM_006223102.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097327.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMEA5760389
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..2175
                     /gene="LOC102557319"
                     /note="carcinoembryonic antigen-related cell adhesion
                     molecule 3-like"
                     /db_xref="GeneID:102557319"
                     /db_xref="RGD:7698003"
     exon            1..232
                     /gene="LOC102557319"
                     /inference="alignment:Splign:2.1.0"
     CDS             169..1596
                     /gene="LOC102557319"
                     /codon_start=1
                     /product="carcinoembryonic antigen-related cell adhesion
                     molecule 3-like precursor"
                     /protein_id="NP_001316821.1"
                     /db_xref="GeneID:102557319"
                     /db_xref="RGD:7698003"
                     /translation="MEVSSVLLCSGCSPWQGFLLTASLLTSWLLPTTAQVTLESSPPQ
                     VVEGENVLLSVDNMPENIIGFGWFKGETDMNRGIALYSLRYTISLMGPVHSGRETLYG
                     NGSLWIKNVTQEDTGFYTFRIINKHGKIQSNTTLFLHVKSSLFVCGHPFNPEQPTIES
                     VPVSVSEWGSVLLRVHHLPNYLRTLFWYRGALVLNKLEIVRYRTFKDSYELGPAHSGR
                     ETMFNTGSLLLQNVTWKDTGFYTLRTLSTEFNVELIHIYLQVNTSLSSCCDPITPAPL
                     TIDPVPRHVAEGESVLLYVHNLPEALQTFSWYKGVYSLKEFKIAEYSIATKSVFPGPA
                     HRGRATGYTNGSLLLQDLTEKDSGLYTLVTLDSNANIETAHVQVTVHKPVTQPILRVT
                     ESIVTVQSSVVFTCLSDNTGVSIRWLFKNQNLQVTERMTLSPSNCQLRIHAVRKKDAG
                     QYRCEVFTPISSKTSLPVSLAVMNE"
     exon            233..592
                     /gene="LOC102557319"
                     /inference="alignment:Splign:2.1.0"
     exon            593..952
                     /gene="LOC102557319"
                     /inference="alignment:Splign:2.1.0"
     exon            953..1312
                     /gene="LOC102557319"
                     /inference="alignment:Splign:2.1.0"
     exon            1313..2065
                     /gene="LOC102557319"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcagtgcctt ggacactgac cccactatcc acagctcata ggattttgag aagtgctcct
       61 gcctgggaaa aaactcagct ctgaaaaagg aaggacagca gaggccagga gccttgttgg
      121 agctgaaggt cttctcctca gagcaagggc agtatagtga ggagagacat ggaggtgtcc
      181 tctgtgcttc tctgttcagg gtgtagccct tggcaggggt tcctgctcac agcctccctt
      241 ttaaccagct ggctcttgcc caccactgcc caagtcaccc tcgagtcctc accgccccaa
      301 gtggttgaag gagaaaacgt tcttctaagt gttgacaata tgccagagaa tattataggt
      361 tttggctggt tcaaagggga gaccgacatg aaccgtggaa ttgcactgta ttcactgagg
      421 tatactataa gtttgatggg gcccgtgcac agtggtcgag agacattgta cggcaacggg
      481 tcgctgtgga tcaaaaatgt cacccaggag gacacaggat tctacacctt tcgaatcata
      541 aataaacatg gaaaaattca atcaaataca accctgttcc ttcacgtgaa atcctctctt
      601 ttcgtctgtg ggcatccttt taaccccgaa cagcccacta ttgaatcagt gccggtcagc
      661 gttagtgaat ggggaagcgt tcttctccgt gttcaccatc ttccaaacta tctccgaaca
      721 cttttctggt acagaggggc actcgtgttg aacaagcttg agattgtccg atacagaaca
      781 ttcaaggatt cctatgagct gggccctgcc cacagcggta gagaaacaat gttcaacact
      841 gggtccctgc tgcttcagaa tgtcacctgg aaagacactg gattctacac cctacgcact
      901 ctcagtacag aattcaacgt cgaattaata cacatttacc ttcaggtgaa cacctccctt
      961 tcctcgtgct gtgaccctat tacccctgcc ccactcacga tagatccagt gccacggcat
     1021 gtggctgaag gggaaagtgt tcttctctat gtccacaatc tgcccgaagc tctgcaaacc
     1081 ttttcctggt acaaaggagt gtacagcctt aaggaattta aaattgcaga atacagcata
     1141 gcgacaaagt ctgtcttccc gggcccggca cacagaggaa gagcgacagg ttacaccaac
     1201 ggatctctgc tcctgcagga cctcactgag aaagactcgg gattgtacac acttgtaaca
     1261 ttagacagta atgccaacat tgaaacagcc cacgtgcaag tcaccgtgca caagcctgtg
     1321 acacaaccta tcctgagagt cacggagagc atagtcacag tacagagctc agtggtcttc
     1381 acttgcttgt cggacaacac tggagtctcc atccgttggc tcttcaagaa tcagaatctg
     1441 caggtcacag agaggatgac cctatcccca tcaaattgcc aactcaggat tcatgctgtc
     1501 aggaagaagg atgctggaca gtatcgatgt gaggtcttca ccccaatcag ctccaagacc
     1561 agtctccctg tcagcctggc cgtgatgaac gagtgacccc tcctctcatc ctacagcaga
     1621 gtgggggtcc tttctgtatt gagatgccca cacctacaca accctgtcag ttacagattt
     1681 ccattcatgc tcatggccat ctgtacttct ctcccatccc tccctacacc tgatactgaa
     1741 cccctccatt atcttctata tcccctcttc caccaagttc cctttctcct tcttccccct
     1801 ccaactctat ttcccccttc taagtgggtt tcaatccaca tttgaccttc cttcttgttt
     1861 agcttctttg ggtctgtgga gtgcagtgcg tgcatcttgt atttcatggc taatatccac
     1921 ttataagtga acacatgcca tgcatgcctc tttgggactg gacttcccca ctcaggatgt
     1981 tattctgaag atccatccat gtgccttcaa aattattgtt gtcattgtgt ttaatagttt
     2041 aacagtagcc catgttgtgt atgaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2101 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2161 aaaaaaaaaa aaaaa
//
