LOCUS       XM_039101471             627 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L31-like
            (LOC102557182), mRNA.
ACCESSION   XM_039101471
VERSION     XM_039101471.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039101471.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 34% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..627
                     /gene="LOC102557182"
                     /note="60S ribosomal protein L31-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins, and 67% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:102557182"
                     /db_xref="RGD:7736966"
     CDS             1..594
                     /gene="LOC102557182"
                     /codon_start=1
                     /product="60S ribosomal protein L31-like"
                     /protein_id="XP_038957399.1"
                     /db_xref="GeneID:102557182"
                     /db_xref="RGD:7736966"
                     /translation="MMGTVGASVLLLVLQTSVTCVALGAALTDHCIANDFGRFRFMFM
                     TLGVGRKFFLTSVPNVFIEKCDTQLGPGRVAPAKKGGEKKGRSALNEVVTQEYTINIH
                     KRIHGVGFKKRAPWALKEIRKFAMKEMGTPDVRTDTRLSKAVWAKGTRNVPYRIRVHL
                     SRKHNEDEDSPDKLYTRVTYVPVNTFRNLQTVNVDEN"
ORIGIN      
        1 atgatgggca cagttggggc ctctgtgctg ttgctagttc tgcagacctc agtcacctgt
       61 gtagcactcg gagcagccct gactgaccac tgcatcgcca acgactttgg aaggtttcgc
      121 ttcatgttta tgactttggg tgttggaaga aagttcttcc tgacatctgt tccaaatgtg
      181 tttatcgaaa agtgtgatac ccaacttggg cccggaagag tggctcctgc aaagaagggt
      241 ggagagaaga agggccgttc tgcccttaac gaggtggtga cccaagagta caccatcaac
      301 attcacaagc gcatccatgg cgtgggcttc aagaagcgtg ctccttgggc tctcaaagaa
      361 attcggaaat ttgccatgaa ggagatgggg actccagatg tgcgcacaga caccaggctc
      421 agtaaagctg tctgggccaa gggaacaagg aatgttccat accgcatccg agtacacttg
      481 tccagaaagc ataatgagga tgaggattca ccagacaagc tctacacacg ggtaacttac
      541 gtgcctgtta acacattcag aaatctacag accgtcaatg tggatgagaa ctaactgctg
      601 aatgtcaaat aaagttacag aactgcc
//
