LOCUS       XM_039100510            1056 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus E3 ubiquitin-protein ligase
            RNF168-like (LOC102557137), mRNA.
ACCESSION   XM_039100510
VERSION     XM_039100510.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1056
                     /gene="LOC102557137"
                     /note="E3 ubiquitin-protein ligase RNF168-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:102557137"
                     /db_xref="RGD:7505527"
     CDS             1..1056
                     /gene="LOC102557137"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase RNF168-like"
                     /protein_id="XP_038956438.1"
                     /db_xref="GeneID:102557137"
                     /db_xref="RGD:7505527"
                     /translation="MALSKAKPLSLEDCQCLLCMEFLIEPITMPCNHTMCKSCFKALL
                     RKTNLFCPFCRSWISSWARYHTHVNSLINKELWERIQTQYPEECRRRTPGEERSSLVF
                     SDHSPIRVLSNPGELRKEYEEQLIKMEAERQATKERQNRATEEYIKQLLAKELEEEKM
                     WAEKRRLEEREQREEEEAKKSSTSDPVTSPRKKKSKRKHCDDVPKFSPHQPQLESALL
                     YETVQDSKKTSGRKQEAKTEENMSAATLSTGPENPQQGTSNSRYEVFSNYDAKVGSSE
                     DEAPKASCSNIDCYVPSKNIKPEANIHTSAQRETMSKTEETGNSTIEAKEKMSHPSSG
                     ITRPHYQKADRFGETVL"
ORIGIN      
        1 atggccttat cgaaagcaaa gcccttgtct ttagaagact gccagtgtct cctttgtatg
       61 gaattcctca ttgagcccat aactatgcct tgcaaccata caatgtgcaa atcatgcttt
      121 aaagcgcttc tccgaaaaac aaatttattc tgccccttct gccgctcctg gatctcttca
      181 tgggctcggt accatactca tgtgaacagt cttatcaata aggaactgtg ggagagaatt
      241 caaactcagt acccagagga atgcagacgt aggacccctg gggaagaacg gtcttcactg
      301 gtcttcagtg atcattcacc aattcgagtg ctaagtaatc ctggagaact gaggaaagaa
      361 tatgaagagc agctgattaa gatggaggcc gagcgccagg ccacaaagga aagacaaaac
      421 agagccactg aggaatacat aaagcaatta ctggcaaagg aattggagga ggaaaaaatg
      481 tgggcagaaa agcgcagact ggaagaacgg gagcaaagag aggaggaaga ggctaaaaag
      541 agcagcacga gtgatccagt cacatcgcca agaaaaaaaa agagcaaacg aaaacactgt
      601 gacgatgttc cgaagttttc ccctcatcag cctcagcttg agtcagcatt gctgtatgaa
      661 actgtgcagg acagcaagaa aacgtctggc aggaaacaag aagcgaaaac tgaagaaaat
      721 atgtcagcag ctactttgtc aacaggtccg gagaatcctc aacaaggtac ttcaaattca
      781 cgttatgagg ttttttctaa ctatgatgca aaagtgggca gttcagaaga tgaggcacca
      841 aaagcaagct gctccaatat cgactgttat gtcccatcta agaacattaa acctgaagct
      901 aacattcata cttctgccca gagagagact atgagcaaaa cagaggaaac tggaaacagc
      961 acaattgagg caaaagaaaa aatgtcccat ccttcgagtg gaatcacaag acctcattac
     1021 caaaaagctg atagatttgg agaaactgta ttatga
//
