LOCUS       XM_039109048            1759 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102556178
            (LOC102556178), mRNA.
ACCESSION   XM_039109048
VERSION     XM_039109048.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039109048.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1759
                     /gene="LOC102556178"
                     /note="uncharacterized LOC102556178; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, and 85% coverage of the annotated genomic feature by
                     RNAseq alignments"
                     /db_xref="GeneID:102556178"
                     /db_xref="RGD:7531073"
     CDS             1..1038
                     /gene="LOC102556178"
                     /codon_start=1
                     /product="uncharacterized protein LOC102556178"
                     /protein_id="XP_038964976.1"
                     /db_xref="GeneID:102556178"
                     /db_xref="RGD:7531073"
                     /translation="MRKGHEETHTLRASLPCTLTFRKGSKFSCHLQRTGGKELWQDLA
                     RGDLCDFSSKLDGFSRFFFGPPFPRSSGTGAPEAAGGARGARGGGGGERSRRGKGRRR
                     LCLTCVAGRSCGSRSLPAYLSIARAEQRAELARGRCGTTHWRGSSEQPSRAPAPPSAS
                     CLRARTPAHSCLGPGPTLPPPAPQPRNPAVPEPRSPAAPRPRGRRPRSKLAGASGLGG
                     SPPPHLFELVAVGSARLRLAFGKVTRRREAQRVGEGDRELARALFMLPGSLGSGCSGA
                     AGSAFPFPGARRQQSLYATQPRRVLCQVCTAGEARSARRQMLLPPRRRRLPAPELYNC
                     HTAPELNLNRE"
ORIGIN      
        1 atgcgcaaag ggcacgaaga gacacacact ctcagagcct cactcccctg cacactgaca
       61 tttagaaaag ggtctaaatt ctcctgtcat ttgcaaagga cagggggaaa ggagttgtgg
      121 caagacctag ccagaggaga cttgtgtgac ttttccagca agttggacgg cttttctcga
      181 ttttttttcg gccccccttt cccacgctca tctggaaccg gggctccgga ggcagcaggt
      241 ggagcgagag gagcccgagg gggcgggggc ggagaaaggt caaggcgagg gaaaggcagg
      301 agacgccttt gcctaacctg cgtggcgggg cgttcgtgcg gctctcgctc tctccctgct
      361 tatttatcga tcgcacgggc agagcagcgc gcggagctcg ctcgggggag atgcgggacc
      421 acccactggc ggggaagcag cgagcagccc tctcgcgccc ccgcgccgcc gagcgcctcc
      481 tgcctccgcg cccggacgcc agcccactcc tgcctcggtc ccggccccac gctgccaccg
      541 cctgccccgc agccccggaa ccccgcagtc ccggagcccc gcagccccgc agcgccccga
      601 ccccggggac gccggccgcg cagtaagttg gcaggagcga gtggcctggg cggctcgcct
      661 cccccgcacc tttttgaact tgttgctgtt ggctctgctc gcctgcgcct ggcttttggg
      721 aaggtgacaa ggaggaggga ggcacagagg gtgggggaag gggacagaga gctcgccaga
      781 gctttattta tgctccccgg gagcctggga tctggctgct cgggagccgc tggctctgcc
      841 tttccctttc cgggtgcaag gcgacagcaa agtctctatg caactcagcc ccggcgcgta
      901 ctttgccagg tatgtacggc gggcgaggcg cgttctgcgc ggaggcagat gctgctgccg
      961 ccacggcggc ggcggctgcc agctcccgag ctctataact gtcacactgc acctgagctg
     1021 aacttgaaca gagagtgaag gggcccatca ggcgaacgct ctctttcggc tggcacagag
     1081 ggtgtcagtc gacgtgaggg gacagagaac tctagaccga cgccccccgc cgcgagccct
     1141 gcacttcacc tccatctctg caagcgcagc gttgagtaga ggaggccagc ggactccaag
     1201 ggacgcggga cagcggctgt gaccgcattt ctggagctac aacaacaggt cgtctttttg
     1261 agacgccttt ggcgggaagg accacttcag cagaagggga aggtgaaaag gttctttctt
     1321 ttaagagact accactggtt gactttccct gtttcctctc acctgctcta tataccgacc
     1381 ctgtatcaac cagactgtat caggggagaa gtgaagacac ctgtttgaag caaggctgtc
     1441 tctaaagtca cctgtgcgtt tagatgtgcc aggaggtgcc ctggtccaac tgttggcaga
     1501 gctttgttta ggctctatgg agagagattt ttaggtcact gtattttttt tttctctctt
     1561 agtattccaa atacttgtct gtgagagaaa tctggctttt tgggtactgt gacttcacct
     1621 gcgccacctt ggaataaccg tgttcctgtg agccgtgttc cccagtgttt tgtctgaggt
     1681 gaagaagtgg ggcattttgt tactttcatt gtgttacttt gggtgacccc tgatcactct
     1741 tgtgacctct acttcagac
//
