LOCUS       XM_039098347            4961 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 1007 like 2
            (Zfp1007l2), transcript variant X2, mRNA.
ACCESSION   XM_039098347
VERSION     XM_039098347.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4961
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..4961
                     /gene="Zfp1007l2"
                     /note="zinc finger protein 1007 like 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 long SRA reads, 6 Proteins"
                     /db_xref="GeneID:102556098"
                     /db_xref="RGD:7732163"
     CDS             2372..4276
                     /gene="Zfp1007l2"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X2"
                     /protein_id="XP_038954275.1"
                     /db_xref="GeneID:102556098"
                     /db_xref="RGD:7732163"
                     /translation="MDALTYDDVHVNFTREEWALLDPSQKSLYKDVMQETYRNLTAIG
                     YNWEDHSFEEHCQSFRRYGRHERCHTGEKPSENTQCGKAFAQHSHLQRHKSTHTGEKL
                     YECKPRDKAFTYDSQLQTLERIHSGEKPYKCNQCGKTFERRCNLGRHKLIHTGRKSYK
                     CNQCGKAFARHSHLKLHGITHTGEKPYECDQCGKAFASHSYLQVHKTIHTGEKPYVCD
                     QCGKAFAHSRPLRRHKIMHTRKKTYKCNQGGKAFARHSHLKTHGVTHTGEKPYKCDQC
                     GKAFASHRYLQVHKRIHTGEKPYECDQCGKAFASHSHLQVHRITHTGEKPYKCDQCGK
                     AFAYHSYLQVHKRIHTGEKPYVCDQCGKAFAHLRHLQVHGITHTGEKPYKCDQCGKAF
                     TSHSYLQVHKRIHTGEKPYVCDQCGKAFAQLSHLQVHGITHTGEKPYKCDQCGKAFSS
                     HSYLQVHKRIHTGEKFYECDQCGKAFASHSHLQVHKRIHTGEKPYVCDQCGKDFVVQR
                     DLKRHKRTHTGEKPYKCNECGKAFVWNGSLRAHKVIHTGEKPYKCNECGKAFACNTSL
                     RTHKAIHTGVKPFKCKQCGKAFVGQNYLKKHERIHTGEKLYECNECGKAFVFDASLRK
                     HKAVHTGVKP"
     polyA_site      4961
                     /gene="Zfp1007l2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttatctttt tcatagtgat ttgcatattt gctgtcttga tttatgcatt taaattttcc
       61 atattcttta ttatcttcca cactactttt tcttaatttt aagttgtgtt tgataagtta
      121 gagaatttta ttttcattta tatgtataag tattttgcct ttatgtatgt ttgagcacca
      181 tgttcctggt gtcttccgtg gaggtcagaa gaggaaatca gattttctgg aactggagta
      241 ggacatggtt gtgagttcct atcccacacc tggaattaaa acaataacat gttcacttac
      301 cgtaattggg ttttttaaca aacccaaact cttattaaaa ctaccagtag ttgcacttcc
      361 agaaaatctg atgccctata ctgaccttca aaggtcataa ataatattat ataaagaggt
      421 ttgtataact ttttaaagtg atgtattgtg cctgtgactg tgctgtgtat ggatgcccta
      481 taggccagaa gtatacgatc ttctagaact ggatttaggg tacttgtgga ctacctgacc
      541 tgtatcccaa gaaccaaatg caggtcctct tcagaaatca tagacattgt ggactccaag
      601 ctcctcagcc tggacccagt gagttttgaa gtgtctgttg tatcatcaac tcctcttgaa
      661 cctgattttc ttggtgtgtt ggttcacagt gaatgctgag atcaggggag aggaaggctg
      721 tccttttcaa tgaatagttc ttactgtctg tgagcctttg tttgcagttg atccctgtca
      781 acatgatctg actcacagtt tgcatctact gctttataag gtatttcatt gtcttcccaa
      841 gcattcaatg tgctagacta ggttgtctga catttttttt tactttttat tatatttatt
      901 aattcgtgac tgtgacaact accccatttt ccaagaaagt tttctcttga tactgctaca
      961 gtgtgctgca gtatcatggt aaggggctgt aagtggcatg aaacataagg accacaattt
     1021 ttaactgcaa gccatgatgg tgtgtaatga ttaaatgaaa atatttgtta tggatggtca
     1081 gatgaagatt ccaaaatatc atatctaagg tattttcaat tgtttctcct gtcttcttgc
     1141 agtatttgtg gctataaaca ttgtcttgtg catgatttta aatgtcccat ttttaattcc
     1201 tcattgcaat tttggttcca gtcatatcat gaatggagtg atcatggagc aggacaagct
     1261 ggcctgctcc tgtattgatg agaacttcac aactaactat aagatgttgg ccaccctggt
     1321 tgaagggaac tttttagagg tctaactgga tttccatgtc cccacactga tctgtgtggc
     1381 tgtaaacatt ttccaaaacg tcaagatata tgtcttgctt ttctgcagga aaatcagcaa
     1441 tgtgaaatca cttgaccatc ctaactttat caagctgttt cacatggtca gacaagagaa
     1501 aacacctacc agttgaagga taatgccttg gatggagaga cactagaaca agtcattgaa
     1561 ggtgggggtc tttagaggaa agtctctatg caaagttcaa aggatgtttg ctgagatagt
     1621 acatgctgtg cagtactgcc atgaccatca cattttccac agagacataa agaccagcaa
     1681 gctgttaatc gacagcagta ggaacgccaa gctgtgtgat tttggcctgg gcagaagcta
     1741 gcagatttct gggacacact tccttacagt gccccagaat tttagcaagc acaggaacat
     1801 gagagctgcc ctgtggatat ctggagttta ggggtcctcc tgttcttcaa ggtggccagg
     1861 atctcacctt tctgaggcaa gtattttgca ggtgtgaaac tgcagattat caagcaccac
     1921 aaactttagc attccttttt atgtttccat ttatttttta aggtcatcat tgaactattg
     1981 attgtcaatt ccagaagaaa tcccaccatc cacaaaatca tgatgtgcct catgattagt
     2041 gaaagtgagg catgtttatt acctccttcc tgtgtatttc tgctttgaag ttttgaagag
     2101 gaccagaagc caggcagtag gaatgtacag gctcttttaa caatttgatg ctcactctaa
     2161 cccttacgga ggtgctcaag tctctcaaga ctactggcca atcagagttt tcactggacg
     2221 tgccaatcag aagagaaggc gggcatttcc gggtgccttg ttgcaggatt cgcttagtcg
     2281 ccaagccttc ttaaatggtc ctgcctgctg tgctctgtgt cccgcggttg gattctgtga
     2341 ggcatgctca ggcaagctcc aaagttgcga catggacgca ttgacctatg atgatgtaca
     2401 tgtgaacttc actcgagaag aatgggcttt gctggatcct tcacagaaga gtctctacaa
     2461 agatgtgatg caggagacct acaggaacct cactgctata ggttacaatt gggaagacca
     2521 tagttttgaa gaacattgtc aaagtttcag aagatatgga aggcatgaaa gatgtcatac
     2581 tggagagaaa ccatctgaaa atactcagtg tggtaaagcc tttgcacaac atagtcatct
     2641 ccaaagacat aagagcacac atactggaga gaaactctat gaatgtaagc cacgtgataa
     2701 agcctttaca tacgattctc agcttcaaac tcttgaaagg attcatagtg gagaaaaacc
     2761 ctacaaatgt aatcaatgtg gtaaaacctt tgaacgccgt tgtaatcttg gaaggcataa
     2821 actaatacat actggaagaa aatcctacaa atgcaatcag tgtggtaaag cctttgcacg
     2881 acacagtcat ctcaaactgc atggaataac acatactgga gagaaacctt acgaatgtga
     2941 tcaatgtggt aaagcctttg catctcatag ttatctccaa gtacataaaa caatacatac
     3001 tggagagaag ccctatgtgt gtgatcaatg tggtaaagcc tttgcacata gtcgtcctct
     3061 tagaaggcat aaaataatgc atactaggaa aaaaacctac aaatgcaatc agggtggtaa
     3121 agcctttgca cgacacagcc atctcaaaac gcatggagta acacatactg gagagaaacc
     3181 ttacaagtgt gatcaatgtg gtaaagcctt tgcatctcat aggtatctcc aagtacataa
     3241 aagaatacat actggagaga agccctatga atgtgatcaa tgtggtaaag cctttgcatc
     3301 tcatagtcat ctccaagttc atagaataac acatactgga gagaaacctt acaagtgtga
     3361 tcaatgtggt aaagcctttg catatcatag ttatctccaa gtacataaaa gaatacatac
     3421 tggagagaag ccctatgtat gtgaccaatg tggtaaagcc tttgcacatc tccgtcatct
     3481 ccaagttcat ggaataacac atactggaga gaaaccttac aagtgtgatc agtgtggtaa
     3541 agcctttaca tctcatagtt atctccaagt acataaaaga atacatactg gagagaagcc
     3601 ctatgtatgt gaccaatgtg gtaaagcctt tgcacaactc agtcatctcc aagttcatgg
     3661 aataacacat actggagaga aaccttacaa gtgtgatcaa tgtggtaaag ccttttcatc
     3721 tcatagttat ctccaagtac ataaaagaat acatactgga gagaagttct atgaatgtga
     3781 tcaatgtggt aaagcctttg catctcatag tcatctccaa gtacataaaa gaatacatac
     3841 tggagagaag ccctatgtat gtgatcaatg tggtaaagac tttgtagttc agagggatct
     3901 taaaagacat aaaagaacac atactggcga gaaaccttac aaatgtaatg aatgtggtaa
     3961 agcctttgta tggaatggta gtctccgagc acataaagta atacatactg gagagaaacc
     4021 ttacaaatgt aatgaatgtg gtaaagcctt tgcatgtaac actagtctcc gaacacataa
     4081 agcaatacat actggagtga aacctttcaa atgtaagcag tgtggtaaag cctttgtagg
     4141 tcagaattac cttaaaaagc atgaaagaat tcatactgga gagaaacttt atgaatgtaa
     4201 tgaatgtggt aaagcttttg tatttgatgc tagtctccga aaacataaag cagtacatac
     4261 tggagtgaaa ccttaagaat gtaagcaatg tggtaaagcc tttgtaggtc agaatgacct
     4321 taaaaggcat gaaagaattc atactggaga gaaaccttac aaatggaatg aatgaattaa
     4381 agcctttgta tgtaatgcta gtctccgaaa acataaagca acacatacta gagtgaaacc
     4441 ttatgattgt aagcaattta gtaagttctt tgcctctcat gatcaacttt gacaacatga
     4501 aagaattcat actggagagc aaccttacaa atgtagtcaa tgtggtaaag ccttttcaca
     4561 atcaagccac ctccaactac ataaaagaac acatacatac taaagagtaa ccctatgaat
     4621 gtaaccaatg tagtaaagcc tttactgtga tcttcaaagg tatggtggtt taaatatact
     4681 tggcccatgg caagtggcag tgttaggagg tatggccttt ttggagtaga tgtggccttt
     4741 gaggatgtaa gtcactgtgg gggagggtgg gctttgagtc cccatgctta aactctgccc
     4801 agggcagaag agtcttctgg ctgccttctg atcaagatgt agaactctct cctccagcac
     4861 catgtctgct tggacactga cattccttcc accttgataa tagactgaac ctctgaatct
     4921 gtatacctcc cctcccccca attaaatgtc ctttataaga a
//
