LOCUS       XM_006255615            1332 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus heterogeneous nuclear
            ribonucleoprotein C-like 1-like (LOC102556082), transcript variant
            X1, mRNA.
ACCESSION   XM_006255615
VERSION     XM_006255615.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006255615.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006255615.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1332
                     /gene="LOC102556082"
                     /note="heterogeneous nuclear ribonucleoprotein C-like
                     1-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 21 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102556082"
                     /db_xref="RGD:7564574"
     CDS             70..528
                     /gene="LOC102556082"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein C-like 1
                     isoform X1"
                     /protein_id="XP_006255677.1"
                     /db_xref="GeneID:102556082"
                     /db_xref="RGD:7564574"
                     /translation="MCVSCDPPSYSPVFIPSPLSTSLSLSIRLNMAGKSGPDSAHPGQ
                     KRPQDRIIFRVDESKRTPLFVNQVPAKSRRTCTGVKNTHNTHKTFRNSHLPLGQIKSD
                     QTEELDSIRRELSKIKARVDSLLESLESMEQQRDQRVSQVKNLASDQNSQ"
ORIGIN      
        1 ctccctgcag ttgagcagac agctctggag aggggctgtt ctggcttatc caaggctggc
       61 agagcacaga tgtgtgtgtc atgtgaccca ccctcctaca gccccgtttt catcccttca
      121 cctctctcta cctctctctc tctctccatc agactgaaca tggctggaaa gtccggacct
      181 gactctgccc atccaggcca gaagaggcca caggacagga tcatcttccg ggtggatgaa
      241 agcaagagga cccctctatt cgtcaatcag gtgccagcca agagccgaag aacttgtaca
      301 ggggtcaaga atacccacaa cactcacaag accttcagga acagtcatct ccccctgggg
      361 cagataaagt cagaccagac ggaggagcta gattccatcc ggagggagct gagcaagatc
      421 aaagcccggg tggacagcct gttggagagt ctggagtcca tggagcagca gagggaccag
      481 cgcgtgagtc aggtgaagaa tctcgcatca gaccagaata gccagtagga ggtggggaac
      541 cttccagact ttcttcactg gtactcttgg gtggcttgtt ttcttgcctt gtatttttgg
      601 aaggccccct agtcactccc atgcgacttg aagtcacctt tctggagctt gggtattgaa
      661 agtctgaagc acggtacagc cagcccaccc agaaaacctc cccctcccgg tagtcgtggg
      721 tttaactctc tttttccatg agtcttgctg tgggcagggt agggaagcca cacagaccag
      781 cagtgcctat tttcattcaa ctgtggtggt cttgcaggag gcacacgaca gggccctgag
      841 cccaaaaggc actattagct ctcatggaat gaaaactgtc tcttccccac acaacactaa
      901 acctgatggt gtgcgcccac ctaagcaacc tcttttggtt aaacccacca tgtgctctat
      961 gaagccataa gctatccttc agaataaagg agcatttatg tctctatctt gagtctcact
     1021 agtaagtata acactaattt tggatttgtt ctacagtcat gtcagaaggg ggaaaaaata
     1081 aaatatgtat ttcttcttct tggtcaggag ttcttacttt gtcctcataa actgagcaga
     1141 cccctggaat acttaataag tctcacagct tcctccactt cagcctgtga agaacaggat
     1201 aagtccctat actggtcagt caggcctgct ctgccttaat agccaggctg taaatgatac
     1261 cacagtatta ggcggtctgc attttagtag accattgctg cccagaccct tgttcccagg
     1321 agccaagcct gg
//
