LOCUS       XM_039100335            1968 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102555994
            (LOC102555994), mRNA.
ACCESSION   XM_039100335
VERSION     XM_039100335.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100335.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1968
                     /gene="LOC102555994"
                     /note="uncharacterized LOC102555994; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102555994"
                     /db_xref="RGD:7628812"
     CDS             124..1737
                     /gene="LOC102555994"
                     /codon_start=1
                     /product="uncharacterized protein CXorf49 homolog"
                     /protein_id="XP_038956263.1"
                     /db_xref="GeneID:102555994"
                     /db_xref="RGD:7628812"
                     /translation="MSCNKEGAVEEVSLDPEDGESPNVCLDVPCSPQDLSLDPDMGST
                     QRSLSKNEVETEDNSELDSGSKLQALESEMVVFEEHGEWSVSSARDKGDLMDCLPLVS
                     DNVEDKVQQPTDQMNQDARSRSSSKSCATQHSTTWADTEADCSRRSMLGKRLGDVKRA
                     SVAPAHHWGPKGGRACRTKKKKKVTKSKKAIPEDIQDPPSDHDSSSDEYNEMQVMRVT
                     ICFKNGEQIISGNSMAPEDKIRKRNVQLRGNFHHMTGSLQMSAPRGHILGMGKLGASC
                     SNRKASVFRGKEQSRPRYPGAAAGVLRKASPKKKSAQEKKPLQDTPRVTGRKPVPLSG
                     QRPKAAPVEIATFPPITCVPTLESSKKHPTTTPLEATEPTHGNTSRKKAVAKNTRETL
                     PVARGDRGLMCKDSMKKSTVLTPTSESYKVKEIAHAQVPPHRAEQPSVCMYRGEMSSG
                     DCNTRASQVPANSQIVALNQGSASPRASVPYGDQDPSVAPPLPVGEKQHQTPGILGCQ
                     QCPLLEKEACRLRKQLAVMQALNKRFQNL"
ORIGIN      
        1 tgtgtttagc gctagtgtgg gtggtgacta tagtgacggt atctcggaag gcctagctgg
       61 tctagccaag actagggata cccttgtcct tacaggtcag gcatgtagac tatcactgga
      121 aacatgagct gcaataagga gggggcagtt gaagaagtaa gtttagaccc cgaggatgga
      181 gaatccccta atgtctgttt ggatgtcccc tgctcaccac aggatctcag cctggaccct
      241 gacatgggat ctacacagag aagcctaagt aagaatgagg tcgagactga ggacaactct
      301 gagttggact cagggtctaa actacaagca ctagaatcgg agatggtggt ctttgaggaa
      361 cacggagagt ggtctgtctc ttcagccaga gacaaagggg atcttatgga ctgcttgcct
      421 cttgtcagtg acaatgttga ggataaagta caacagccaa ctgaccagat gaaccaggat
      481 gctagaagcc gctcgtcctc aaaaagctgt gccacccaac attctaccac ttgggcagat
      541 acagaggcag actgcagcag aagaagcatg ctgggcaaga gattgggaga tgtaaagcga
      601 gcctctgtgg ccccagccca ccactggggg cccaaaggag gtagggcctg caggacaaaa
      661 aagaaaaaga aggtcaccaa gagtaagaag gcaatccctg aggatatcca agacccacca
      721 tctgaccatg actcatcatc agatgagtat aatgaaatgc aagtgatgag ggtgaccatt
      781 tgcttcaaga atggagaaca gatcatatct ggcaattcta tggctcctga agacaaaatc
      841 agaaaaagaa atgtccaact caggggcaat tttcatcata tgactggctc tctgcagatg
      901 tctgctccca ggggccatat tttgggcatg ggaaaactag gggcctcttg ttctaacaga
      961 aaagcatctg tgttcagagg caaggaacag agtaggcctc gttacccagg agctgctgcg
     1021 ggtgtgctga ggaaggccag tcctaaaaag aaatcagccc aggagaagaa acccctacag
     1081 gatactccaa gagtcaccgg gagaaaacct gtcccactgt cagggcagag acccaaggca
     1141 gctcccgtgg aaatagccac atttcctcca ataacctgtg tccctacact tgagagttct
     1201 aagaagcacc ccaccacaac acctcttgag gccactgaac ccacacatgg aaatacatcc
     1261 agaaagaaag cagtagcaaa gaatacaagg gagaccctgc cagtggccag aggagacagg
     1321 ggccttatgt gtaaagacag catgaaaaag tcgacagtgc tgaccccaac gtcagagtcc
     1381 tacaaggtta aggaaattgc ccatgcccaa gttccaccac acagggcaga gcagccttcc
     1441 gtgtgcatgt atcgtggaga aatgagcagt ggagactgca acaccagagc atctcaagtt
     1501 ccagcaaatt cccagatcgt ggccctgaac cagggaagcg ccagccctag agcatctgta
     1561 ccctatggtg accaagatcc gtctgtggct cccccactcc ctgttgggga gaagcagcat
     1621 caaacaccag ggatactggg atgtcagcag tgtcctttgc tagagaaaga agcatgcagg
     1681 ctgagaaaac aactagcggt catgcaggct ctcaacaaaa ggttccagaa tctttgaagt
     1741 gaatgttctg atatctacag tccttcccac aagaagctgg gtctggcctg actctattct
     1801 gcctgaaata ttggacccag actcaatgca ggagagacca gactactacc tgtggatccc
     1861 agggctgtga ccccacatat tccctctcat tctacagcca gagtcacctt tatgcccctg
     1921 tttttgcccc gtgtacccct ggtgacagat gttgcatata aaagtagt
//
