LOCUS       XM_039103652            9766 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102555991
            (LOC102555991), transcript variant X1, mRNA.
ACCESSION   XM_039103652
VERSION     XM_039103652.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103652.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9766
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..9766
                     /gene="LOC102555991"
                     /note="uncharacterized LOC102555991; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     2 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102555991"
                     /db_xref="RGD:7516215"
     CDS             6191..9460
                     /gene="LOC102555991"
                     /codon_start=1
                     /product="uncharacterized protein LOC102555991"
                     /protein_id="XP_038959580.1"
                     /db_xref="GeneID:102555991"
                     /db_xref="RGD:7516215"
                     /translation="MEMIEEEDVGEENQAMVCQGAVVFRRGWKRNKRYLTLLSDVLVV
                     SSKLNKKKFKVKHIIPLTYLWLGDETDIFRTDNSPASKTIYLYWPMGNAVGTFRSMEE
                     TIWWNFFLQRSIRDAKKQNKIDLSLQISTEDIAGCDTPLYVKATNFDTVNDIMSKLLP
                     MMRKHNIEDHQLWFCPHPGEAPRALQGNEYPHDIIMINIQKNFSSRDLRNFTSFPSLP
                     GLIMKYLNSDAQGQFILRPRNSARSQQHKNMKEKTLKKQRTSKSSWWHRSCEPHPDQV
                     CTTPKVNNGGKLFGRELSSICKDGNLPLAILDMLSLLKRKGHTTEGVFIIRPSITMCQ
                     TIKDKLDSEEEVDMNKLSVHVVSWIFKDFLQNIEGSLMTSKLYDEWIAVTKKVDDEEK
                     LAEVQSLLDKLPPANAVLLRQLFQILYEIKSNSSVNEMSSYHLSVGIAPCLLFMPSYC
                     NNGGTNDIPKKISLVTFMIENTPKIFGEDVVAVSYETSLTHPPGAKSSCSQDTSANTR
                     NVKKTKHGLSSCPTERTCPPDYNALPGSPAAPLPCEDILDSEKNEGNAYTNQTIPLLS
                     LPQAPKKCLFGKSLVRIFEGKSLPTPIFDMLSIIAEKGQDSDHIFNTVSEISHWSLRD
                     RIENDEHINWHEEDVLVIASVLMDFIRNIKGSLLTSDLYEDWLTIMEEGTLVGRITAI
                     QRLTRQMPEPNFLLLQYVICVLVMISDSSMNNLDSHTLSLRIAPSVLCGQPASDTLYG
                     DSASRKISVIKMMIDHYLEIFGNDNLFSKHIDERSDDLKMYIDLIFSKGKSPIMKKVI
                     VGPNGTTCSNDEKVNISNAALQEESPTGSEKHEHTVSTIPSILSPNRLRSRKKSLFGQ
                     PLTSIFEDNKLPTPILDMISIIAEKGQSSDYLFRTISENSHCSLRDKIDTEQPINWND
                     ECVLVVASVLKDFITNIDGSLLTYNLYENWLTVPEEETLAGQISAIQSLLQQIPDPNF
                     ILLKYLICLLVIIKDSPLNKLDTKRLSIRLAPHVLWGWTSSDSLFGKVVSRKISLMEI
                     MIDNYIQIFENDNRYCIHIEKRSAVIKKSDHFINSGVKSTIMEKIIGGLNRKTCYNNE
                     I"
ORIGIN      
        1 ggaaagggaa taacactcga aatgtatata agaaatactc aagttaataa aaaataaaaa
       61 aaaaaaagat gagagaagat taggtaaagc acaagaaacc cagtggacga ggggaaagaa
      121 aaattgtagg agccagaagg ttcaggatga tcatttgaac acagcccaag gagtcattaa
      181 ccagggtagg agaggctcag agtgactgaa gtggcaatca ggaagcctgt atgggtattc
      241 actgggtcct tcacatacat ctgtgcttgg atagcttgag gtatttagag ggttcctaac
      301 agtggaagta gggtaatgtc tgaccattta acctgctttt aggatgattt tccttctatt
      361 cagttgcctc atccagcttt gatatggtgg tttgtaccta ttcttaatgc atcttgtaat
      421 gtcatgtttg gttgatatca ccagatggca ttctattttc tgaaggaaaa gagaggagtg
      481 gtgaatctga gagaggtgag tcaaggaaag acatatgaca aggaagcagt ggagggacag
      541 aaatctgtgg ataagatgta ttgtatgcat aagaaagaaa tgagagtagt ggttttgcat
      601 tgacctggta ttcctatcac tgcatccaac atctcattca gtatgtatag tacctttctt
      661 atcaattacc tctcttctga ataaatagta tatctattta gaatctgatc ctgaaaccac
      721 ctaagtttta ttgtgtaaaa aaatcaacat atattaatac atgataatta gttattcata
      781 aatgctggtc aatggactaa aatgcctgtt gtacagaatg actaatctga ttaatggaaa
      841 cctcttcaat ttaatgaact ttctctctgg gaattagacc ccagaagaaa gaaagatcta
      901 ccatgctcag ggatacgtag gatgaacata gcgaaaatgg ttttttacca aaagtaatgt
      961 tttgattcaa tgcaatcccc cccaaaattc caagacaatt cttcacagat ttgaggagaa
     1021 tagttatcaa cttcatatgg aaagaccaaa cacatagaat agcaaaaaga aatctcaaca
     1081 acacaaaaac tttgggggaa tcaccatctc tgaccacaat ctataatata tagcagtagt
     1141 aataaaaaca gcatgatatg tattggtaca gagtcagaca gataaaatag aactgaagac
     1201 ctgtaaataa aaccacaccc ttatgcacac ttgaccattg acacagaggt caaaaatata
     1261 caattaaaaa aaagcatctt ccataaatag gacaggtcta attggcactt gatttgtcac
     1321 cttgcacaaa cctgaactca acaacaacaa caacaacaac aacaacaaca acaacaaccc
     1381 cagatacact gaatctaata gactagaaag tggaaaagaa actcacattc attggcacag
     1441 ggggaaattt tctgagaaca ctaaaggctt gtgttctaat atcaacaatc aataaatggg
     1501 aatatcatga aactgaaaac tttcagtatg gcaaaagaga gtatcaatag acatattgga
     1561 aaacatacat attggaaaag aatcttcact aagcctatgt cagacaagag gataatatca
     1621 aaaatacata aaacacttaa gatgttgacc tccaaaaaaa aaaaggcaaa gtaggatgta
     1681 tggaacttcc caagagacac agaacttata ggtatactct atatactaag ggaatttttg
     1741 atgacttaat tctgtaactc aactcctcac caatgaccag cagcagtggc gcagtcccac
     1801 aaggcaggca ggcgaagaga aagagtcttc cttcttccaa cgaccttatg tatgtctcca
     1861 gcaggaggtg tgtcccagat caaaggtatg taccaccatc atacctggat cagagacttg
     1921 ctttgtgcca gatgatcttg aatgcagaga tctcctttcc ttagtctcct gggattcata
     1981 gccacaatgc cacaatgtct tcatgccaag atccagaaac tttgcagttt tttgacgtcc
     2041 aattttttga ttcttgatca taaagttgcc tcagaagagc agcatttgca gtttgcagct
     2101 ttttaaaaga ctgaacagag aggcagttat tctaaaacaa atatactcaa ttgtaaatat
     2161 gaaggaagga aaagagtaat tgtgtcgtat gtaggatgct ctgaaaataa aatgaaagaa
     2221 tgtgtactga aattattgct tgaaatattt acccaagtca gaaaaaaaga taaatctaaa
     2281 ttgaatatga agcagcagta tgtcgccctc atgagaaaat aggcatgact atttttctcc
     2341 cacgctggac tcgtcttcct gtagtaatat ttgaggagta ttgtgctaaa tcttctttga
     2401 aaatatggta aaattctgtg tctaatccac gtggcccatg agatttttgg ggcatatttt
     2461 accaaatgtg atgatcctgt gtatatatgt gaaaaccaga agatgtcatt gttttggact
     2521 aaggacatgg accttggata ataatcctgc tcttgcatca aattccctag cagccaaatt
     2581 aggtcaaaac cctgttgctt caatctgaag ttctcttgct cctgacattt ccagtctctg
     2641 tatttgacag taacaaacat cgatacggtg aatgacataa tcagaagttc ctaccagtgg
     2701 tgagaaaaca taacattgaa gattatcagc tgtggttctg tcctggccat gggaaagttc
     2761 caagagcact ccaagggcat gagtgtccac atgatattct gatgataaat gttccaaaga
     2821 acttcagtcc acaagaatta agacatctta caatgataat tccctacttc atctgttcaa
     2881 gatatatcta aaatctgatg cgcaggggca attcatctta aagtccagag acttagcagg
     2941 aagccagcag caaaaaatat aaagagaaaa cgtcttaaga aacaaagaac ttctataaca
     3001 tcgtggtggt acagggtctc tgtgccccac ccggacaaag tatgcaccat cccaagagtt
     3061 aatgagggag aaaaactgtt tggaagagaa cttatttcca tttatcatga tggcaacctg
     3121 ccatcggcag gttctcggca attctggaca tgctgttcct actaaaaagg aaagggtata
     3181 cccacaatca agggtacgtt tacagtatct ctgagtgtaa ccttgtgcca aacagaaaag
     3241 gacaaattgg attcagaaga agagataacc aaacaatctg tttatgtagt ggcatgcatc
     3301 tttaaggtag ggaaagtcct tccatcatcc atcctcagga tttctctgag tctatgggag
     3361 tagtgttctt ccttttgcat tcccttgagt gacagtaaat aggtatgaga taaatctggt
     3421 aagctcaaat ctccactgtt agtgttaata acttgaatga tgttttgctt aggaattttt
     3481 taagcaatgc tattcttggg ctatcaaagg tgaaccctac cctcatttct cggagaccca
     3541 atctcaaagc aaatgttact atactccggt gtacaatctt tctgattctc tttacacctg
     3601 tttggagacc acagttcggg acttagtatg tgtatgtaca aactgaggct cagtgtcaca
     3661 aggtattttt ttctttggaa cttgaatagc tgtagttttt aatagtagtc tccatccatt
     3721 gcaaagagaa catttttgat gggtcagggc tatattatct gtgaatatta agttaaatat
     3781 ttataataga gttaggagtc acacttgttt agtgaaatag gggcaggacg ttctctaaga
     3841 accagaccac atgtgcctcc atgcttccag taccagacat ggctttgtgc tcctgagaaa
     3901 tcagataaga gttcctatgg ttgtctttgt tgtggttacc ataatggtat gtttctatca
     3961 tttaaaaagc gtatttaagc tgaagtattg atcacgtata tgtgttagtt tgctcagccg
     4021 tccactagcg gaatgctgat ctaagaaaag gtttttctat agtcaaaata aatctgaaaa
     4081 tctacgcttt gatttctggt ttaaattgat gaaacttact ggacatatat ttcagggaat
     4141 gttctactta ggggaaattt tgggagctgt gaagaaaatt ggaactaaac tgaaatttac
     4201 agaagaatgt actttgaaca attttcatga ttaaattttt ccacaaaata tttttcctcc
     4261 ctttataaga acttcctaca aaacattgaa ggaattctga tgacttcaga actctatgat
     4321 gagtggattg ttgtaaccaa aaaggtcaat gactacgaga aattagacac agtgcagagg
     4381 taattgttgg caaactgtgt gaacaacatc aacaaaatag aagtagtatt tgcttacaca
     4441 cactagaaat aatatatcac agaaatattt actaaaaaca ttgacaggta gcaaaaggtt
     4501 tcaattgttc acaaacacac aagacacttt caaaagagaa gtgtgagtta cagtgggaat
     4561 tagagtagcc ctggcttatt atcctactgc cacattccaa ttagatttgt ctttttttct
     4621 gaattggata aatatttcaa gtaataattt gagtaaaaat tctttcattt tattttcaga
     4681 gcatccagca atcgatccaa ttactctgtt cctttcattc atatttagaa attgagtata
     4741 cttgtttcaa aataactgtc tctgtgttca gtcttttaga aaaactgtca actgcaaatg
     4801 ctgctattct gaggcaacct tttcgaatat tatatgaaat taaaagtaat tcttctgtta
     4861 atgaaatgtc ttcttaccat ctatctgttt ggatagcccc atgtctctca ttcatgccca
     4921 gctcttccaa taatggaggg acaaatgata ttgccaaaaa gattcagaga aacatgaagg
     4981 caatgtatat accaacccac cagtaccttc tcaaaatcca ccacaaccaa caaagaaatg
     5041 tttgtttggg aaatctctta tgagtatttt tgaagacaaa aagttgcctg gttcaatatt
     5101 taaaaagtta aaaataagaa gtggacagac agccgccagt atccatgatt ctggaccgtg
     5161 cccaggaccg aactgaaccg gccaaacagc tccctgcacc cgaatccagt ggaagagaaa
     5221 gctggaccct cagaagcgtg gacactcctg agaagtcaga ggagactacc ctctactcac
     5281 agtgcagacc caagagggaa ctgcatagtg ccaactgtgc ccgctgggtg caaggaccta
     5341 ggagcaatca ggggcaggac ccattgacga catctccaga atatcgctga cacacctgag
     5401 aacagagtgt agtgtctgaa tgcatacgaa agaggcttca atgttcattt gatttcagat
     5461 agattccaag aggcaatgtt tccctgaatc cccaacattc aaaggcacat agatttagta
     5521 acatacacag aggactttgg ggaagcttat ctgtatgttt acctaaagag agatgtgttc
     5581 aaatgattta ataaacctgt ggctagttct ggctcacaat tggatcatac atagagccca
     5641 tcgtggtggg aaggcatgac ggggaacacg aggcagctgg tcacactgct ctgcactcag
     5701 tcagaagtca gataaaattg atgtgtttgc agaacctgag aagtcccaaa atgttcatga
     5761 ttaaattttc caaatacttt tctgcttcac agtctgctgc cgtcattaag ctcctgtgct
     5821 tttctgaaat gacaggtttg gagacaaatg ctggaaacta tggaaataca tatatgaaat
     5881 aggtttcttc actgaaaaaa tgagccaact gaatccaaat caggagtata aaactacagg
     5941 gagagaaata gaatgcacat gtcactctgc cagctggcat gagccttaga atattgacat
     6001 cacaatggtt cttcagcctg acaactacag aatcctcaga cttcagttgc tttctagaca
     6061 ctgcagtaac cagtttggtg tttagcggca ggaaggcgaa cggaaatttc acattgttcg
     6121 ataaattctt catagcaggc tcgtctaaaa aggtggagtc ctgtatgaag agaattcttt
     6181 ttttttcaac atggaaatga ttgaggagga agatgtggga gaagaaaatc aagccatggt
     6241 ttgccaaggt gccgtggttt tccgaagagg atggaaaaga aataaacgat atctcacact
     6301 gctcagtgat gttttggttg tctccagtaa actaaacaag aagaagttta aggtaaaaca
     6361 tatcattcca ttgacttacc tgtggcttgg tgatgaaaca gacatattca ggacagacaa
     6421 cagccctgct tccaagacca tttacctata ttggccaatg ggaaatgctg ttggcacctt
     6481 tcgttccatg gaagagacca tttggtggaa cttctttcta caaagatcca tacgagatgc
     6541 gaagaagcag aacaaaatag atttatccct gcagatatcc actgaagaca ttgcaggctg
     6601 tgacactcct ctatatgtaa aagctacaaa cttcgataca gtgaatgaca taatgagcaa
     6661 gttactacca atgatgagaa aacataacat tgaagatcat caactgtggt tctgtcctca
     6721 ccctggggaa gctccaagag cactccaagg aaatgagtat ccacatgaca ttataatgat
     6781 aaatattcaa aagaacttca gttcacggga cttaaggaat tttacatctt tcccttccct
     6841 acctgggctg atcatgaaat atctaaactc tgatgcacag gggcaattca tcttaaggcc
     6901 cagaaactca gccagaagtc aacagcacaa aaatatgaag gaaaagactc ttaagaaaca
     6961 aagaacttct aaatcatcgt ggtggcacag gagctgtgag ccccaccctg accaagtatg
     7021 caccacccca aaagttaata atggaggaaa actgtttgga agagaactca gttcaatttg
     7081 taaggatggc aacctgccct tggcaattct ggacatgctg tccctactaa aaaggaaagg
     7141 gcacacaacc gagggtgttt ttataatacg tccgagtata acaatgtgcc aaacaataaa
     7201 agacaaattg gattcagaag aagaggtgga catgaacaag ctatcagtgc atgtcgtgtc
     7261 gtggatcttt aaggacttcc tacaaaacat tgaaggaagt ctgatgactt caaaactgta
     7321 tgatgagtgg attgctgtaa ccaaaaaagt cgatgacgag gagaaattag ctgaagtgca
     7381 gagtctttta gataaactgc cacctgcaaa tgctgtgctt ctgaggcaac tttttcaaat
     7441 attatatgaa ataaaaagta attcttctgt taatgaaatg tcttcatacc atctatctgt
     7501 tgggatagct ccatgtctct tattcatgcc cagttactgc aataacggag ggacaaatga
     7561 tattcccaaa aagatttctc tggtaacatt tatgatcgaa aacactccaa aaatttttgg
     7621 agaggacgtg gttgcagtgt catatgaaac atccctaact catcctcccg gagcaaagtc
     7681 ctcatgttcc caggacactt cagcaaatac cagaaacgtg aagaaaacca aacatggact
     7741 cagcagctgc cccactgaga ggacatgccc tcctgactat aatgcactgc caggaagtcc
     7801 agctgcccct cttccctgtg aagacattct agattcagag aaaaatgaag gcaatgcata
     7861 taccaaccaa acaatacctt tgcttagtct accacaagca ccaaagaaat gtttgtttgg
     7921 caaatctctt gtgagaattt ttgaaggcaa aagcctgcct actccaatat ttgatatgtt
     7981 atccataatt gcagagaagg gacaagattc cgatcacata tttaatacgg tatctgaaat
     8041 ttcacactgg tccctgaggg acaggattga aaatgacgaa cacataaact ggcacgaaga
     8101 agacgttcta gttatagcat ccgtattaat ggacttcatt aggaacatta aaggaagctt
     8161 acttacttct gatttatatg aagattggct taccatcatg gaagaaggaa ctctggttgg
     8221 aagaattact gccatccaaa gacttacacg acagatgccc gaaccaaact ttcttttact
     8281 acaatatgtc atttgtgtat tagtaatgat aagtgactct tcgatgaata atttagactc
     8341 tcacacatta tctctccgca tagctccgtc tgtgctatgt ggtcagcctg caagtgacac
     8401 actatatggg gattctgcct caagaaagat atctgttata aaaatgatga ttgaccacta
     8461 ccttgaaata tttggaaatg ataatctatt ttctaaacat attgacgaaa ggtctgatga
     8521 tctaaagatg tatatagatt taatcttctc taagggcaaa tctcctatta tgaaaaaagt
     8581 cattgttggc cccaatggga caacctgcag taatgatgaa aaagtaaata tttcaaatgc
     8641 tgctctgcag gaagaaagtc ctacaggttc agagaaacat gaacacactg tatctactat
     8701 tccctcaata ctgtctccaa atcgactacg atctaggaag aaaagtttgt ttggccaacc
     8761 tcttacaagt atttttgaag acaataagct gcctactcca atactagata tgatatctat
     8821 aattgcagaa aaaggacaga gttctgatta tttattcaga actatatctg aaaattcaca
     8881 ctgttccctg agggacaaga ttgacacaga acaacctatc aactggaatg acgaatgtgt
     8941 gctggttgta gcttcagtct taaaggactt tattacaaat atagatggaa gcctacttac
     9001 ttacaattta tatgaaaatt ggcttaccgt cccagaagaa gaaactctgg ctggacaaat
     9061 tagtgccatt caaagccttc tacaacagat accagatcca aactttatac tactgaaata
     9121 tctcatttgt ctattagtaa taataaaaga ctcacccttg aataagctag atactaaaag
     9181 gttatcgatc cgccttgctc cacatgtctt atggggttgg acttctagcg actcattatt
     9241 tgggaaagtt gtctcaagaa agatatctct tatggaaatt atgattgaca actacattca
     9301 aatatttgaa aatgataata gatattgtat ccatattgag aaaaggtctg ctgtgataaa
     9361 gaaatctgat catttcataa attctggtgt gaaatcaact attatggaaa aaatcatcgg
     9421 tggactcaat aggaaaacct gttacaataa tgaaatttaa atatttcata tacagctctg
     9481 caggaggaag gtcctatagc aggagaaaac agaagaacta ccacatataa gttatagagg
     9541 atgatgggaa gatgttctaa ggtcattcta ttttcatgtt cctgtctacc gcccacttaa
     9601 ttgtagcaga agatattatt acaagatcct acttctgctt tatatttcac catattattt
     9661 acaaataatt ttccctcatt aaacttattt tattctgcat attatatatt gttttctatt
     9721 ataataaatg ttattaaatt gttttattgc ttacactgca atgtgc
//
