LOCUS       XM_039106632            5468 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 120-like
            (LOC102555578), transcript variant X1, mRNA.
ACCESSION   XM_039106632
VERSION     XM_039106632.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5468
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5468
                     /gene="LOC102555578"
                     /note="zinc finger protein 120-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 14 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:102555578"
                     /db_xref="RGD:7547607"
     CDS             2703..3692
                     /gene="LOC102555578"
                     /codon_start=1
                     /product="zinc finger protein 120-like isoform X1"
                     /protein_id="XP_038962560.1"
                     /db_xref="GeneID:102555578"
                     /db_xref="RGD:7547607"
                     /translation="MGIVTYDDVHVNFTQEEWALLDPSQKSLYKDVMLETYRNLAAIG
                     YIWEDLNIEEHFQSSRRYGRHERSHTEEQSSQFIPCGEALVLHRYLQIHKRTHTGQKS
                     FECNQCGRAFSGNHHLLRHKRIHTGEKPYECNLCGKDFTRHCSLQTHKRIHTGEKPYE
                     CNQCGKGFVCHSSLKKHKRTHTGEKPYKCSQCDKAFSSPSGLLYHKRTHNGERPYECN
                     ECGKAFNHNGHLHIHKRTHTGEKPFECDQCGKTFARNNHLLQHKRVHSGEKPYECKHC
                     GKAFAYYNSLQVHNRTHTGEKPYECNQCGKAFSCTSGLLHHKQIHNTHRGETF"
ORIGIN      
        1 ctttttcctt tttaatcatt gcttcctccc tggagaaccc gttaactgtc tactcaactg
       61 gctttgctct gtgtgtatgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtacatatat
      121 gtgtgtgtga atatatattt gtgtatatat atatgtgatc gtacataatc atgacttttt
      181 taaagtacaa attcagtcat tttattttga atatattaag cttgtagttg cttgactctg
      241 tggatgtgaa gcctgactgt acatacagaa taccagggac agagcctggc aggtgaaggc
      301 tcactggatc gatgggtcag ttcacactgt cccactgtgt gctgagtact gggtctggac
      361 ctactaatcc tttctccact gcaccatggg tctgagatgt ggtctgatga tgctatgttt
      421 ttattcaggg ccttggttgt tgttaggact ggtacccaag ctaggagtga aaggaagttt
      481 gccttcagca atcctccctt cggagcatct tctctgccag catttgatgg ttgtcttctt
      541 ctcctggtcc catttgctca atgtctttct gatcttggtc ctgaatgtag atgggtccac
      601 tcctatcaga gctaccccat gaggattccc aagttttcat tatgtttgag ctagttgaga
      661 cccatctatc cacacagcaa acatctgcct atgtgctggg caatggatgt gcacttgttt
      721 gtgtctttgg tgctatgata gaaacgctga ctaaaatcat cttgactaca agggtttgaa
      781 aagggtttgt ttggcttaca cttctaatcc atcaccagag gaagtcaaga taggacctca
      841 aggcaggaac tgaagcagag accatgaggg agcactgctt attggcttgc tccccatggc
      901 ttgcttgctc agcccacttt cttatacaat ccagaatcct gtgcccagaa atggcttcac
      961 ctagtatagc atgggccttc cagcattaac aaattaaaaa acatgcaaat gaatcatagt
     1021 cttggggttg tttgaatgag aatgttgcct attggtattc agttgatgaa acgttttgaa
     1081 ggattagaat gtgtggcttt gatagaggaa atgtgtcagt tggggtaagg tttcaaaagc
     1141 cctcagcagt tctagcctct ctctctgtct ctgtctctgt ctctctgtct gtctctatct
     1201 ctctctgtct ctctgtctct ctcttccccc cacccccgct acctacagct gtaacacact
     1261 caacttctgt tacagcccca tgcctgtctg cttcctatca tggaaattgt aaataaattg
     1321 taagtaactt tctgaaattg taagtaaatc cccaattgag tgctttattt cataagactg
     1381 actttggttg tgttgtcatg gaaatataac agtggataca agtttggttc ccagtgccca
     1441 tgtggggcag ctcccagcag cctctaactc cagctctaag gtatccatca ctctcttctg
     1501 gactatgtgg gtatctgtac acacacacac acacacacac acacacacac acacacacac
     1561 agagagagag agagagagag agagagagag agagagagag agagagagag gttaagaaag
     1621 acacagcaca tgttctgggc atctgaagac tgggaatgtg cactgttcca agatctgagc
     1681 tgtttgaaag gcagtgtaaa gggagtgagc agtaagaaag agttagaacg gtgctccaca
     1741 gacactgcag gcagaacctg cagacctttc ctgaaggctg ctggtcgctg tgcacagcga
     1801 ccctggtgcc catcagaaga gtaatgatcc aatcctttag ttgtggccac aagacacctg
     1861 gtgctattgc taaagctgaa gagagtgaca aggacattgt ccaactaccc ctactgaatc
     1921 agtctcctgg ggcacccaat gctgatgttg ctactggcca gttgttagaa aacctcagtg
     1981 gttgtgtcca atgctacttg gtcattcttg aggccattta cacttgagat tgctgattca
     2041 ggtccatttc tccaggcttt tctgcttctc aatacttcta gccacacttc attttgtcca
     2101 gtgctcatga cttccgagca cgcagcctgg attctcccaa gtcgctctct atgttttcat
     2161 tcaaaattgc ctcttcccag tgttttgtgg ctcccactca tatgcttctt gattaaatgc
     2221 ttcttggtac ttattgatca taattttatg gctgcattat attttatatt atgtatttta
     2281 agacactttc tcatagctta gcctgccctc aatctgtagt gaagataacc ttgaactcct
     2341 gatctttctg tatcattcca agggctggga ttgcaggtgt ctaccactac gcctggcttt
     2401 ccaacattag tactactgaa atgcaaatct gttggaggag aactggtcgc agctggaacc
     2461 actaagtact tcctctagag taagctagag ttctaagggt ggtggtcatg tccctcaaga
     2521 ctcactagcc aatcagaacc tccaaccggg tctgccagtc agaagaggag gcggctcttc
     2581 ctggcaccaa gcctgcaagt tcctgtctga tccttagctg gctcaaacgt ttctgcgtgt
     2641 tatgttctga gttcctctgc tgggtgctgt gagggagttc agacaagctc gaaactccag
     2701 acatgggtat agtgacctat gatgatgtgc atgtcaactt cactcaggaa gagtgggctt
     2761 tgctggatcc ttctcagaag agtctctaca aagatgtgat gctggagacc tataggaatc
     2821 ttgctgctat aggctacatt tgggaagatc ttaatattga agaacatttt caaagttcta
     2881 gaagatatgg aagacatgag agaagtcata ctgaagagca gtcttctcag tttattccat
     2941 gcggtgaagc cttggtactt caccgttatc ttcaaataca taaaaggaca cacactggac
     3001 agaaatcctt tgaatgtaac caatgtggta gagccttttc aggaaatcat catctcctaa
     3061 gacataaaag aatacatact ggtgagaagc cctatgagtg taacctatgt ggtaaagact
     3121 tcacacgaca ctgttctctt caaacacata aaagaattca tacaggagag aaaccttatg
     3181 aatgtaatca gtgtggtaaa ggctttgtat gtcacagtag tctcaaaaaa cataaaagaa
     3241 cacatacagg agagaagccc tataaatgta gtcagtgtga taaagccttt tcaagtccaa
     3301 gtggtctcct gtatcataaa agaacacata atggagagag accatatgaa tgtaatgaat
     3361 gcggtaaagc ctttaatcat aatggtcatc ttcatataca taaaagaaca cacactggag
     3421 agaagccctt tgaatgtgac caatgtggta aaacctttgc acgaaacaat catctcctac
     3481 aacataagag agtacacagt ggagagaaac cctatgaatg caagcattgt ggtaaagcct
     3541 ttgcatatta taatagtctc caagtgcata accgaacaca tacaggagag aaaccctatg
     3601 agtgtaatca atgtggtaaa gccttttcat gtacaagtgg tctcctgcat cataaacaaa
     3661 tacataacac acacagggga gaaacctttt gaatataatc aatgtgttaa agcctttcca
     3721 aaccaaccta gtctgcaaat acataaaaca acacatactg gagagaaact gtttgaatgc
     3781 aaccagtgcg gtaaagccat tgcatattca tggtcttctc tgaatacatg aaagaatatc
     3841 tactggagat atatattatg agtgcaagca atgaagcctt tgcacaaatc tgtagtcatc
     3901 atcttggaag aatccatact ggatagaaac tctgaatgta tttaatatgg tgaagccttt
     3961 tcaaattcca caagtcttca taatcatcaa agagaaaccc tataaatgta tttaatatgg
     4021 tgaaaccttt gcacatttct acagttttca tcatcatgaa agtactcaca ctgtagagaa
     4081 agtctgtgag tgtagcaatg tggaaaagcc tatatgtaat atggtcctct gtgatccaac
     4141 acaactcaaa actcatgcaa tgaaaatgac tagaatttat agtagtgaag ctgctgctgc
     4201 tggatcaagg ccagagaaca tacttgaagg ctgaactgtg accctcccaa ttcacctcct
     4261 cacactgagc cacagtgaaa accagaaagg tctgtgccaa gttacagcta catttcccca
     4321 ccaaacagga tttagtgata ggggctttgt tcatggagtt tactatgtca tctgatacag
     4381 aacgtaggtg ttacaatcta atcaatcata tccactgttc tattgtggtt aggaacaggc
     4441 attatgtttt gaagagtaac agatgaatag aacaagaaat tattaggggc actcattatg
     4501 ttttcaggaa caaaagatgc tcaatggaag ctggtctact atttggaagt ctccagctgc
     4561 cctagggcct gggaatttga acttagtttc accttatgat tacaaagaag ttgataacaa
     4621 aaaggcaata cttaggacat atttcttttg cttgttccca acatttatat atcacagtca
     4681 ttttgaatac ataaaaaaac cacattggag agaaaccatg caaatgtaat caatgtgata
     4741 aagacttttc acaacacagc tctttgcaaa tacataaagg aacatatact ggataggaat
     4801 cttatgaata tacagttgat taattagttg catgtagtag tgtgaaaagt catgaaaaaa
     4861 tgttatactg caaagaaagt catcattgta atcagtgggg tattattttg tacttcatgg
     4921 tatcttcata caagagtaaa gcatttaatg tataatccat cttttaaagc ctttccatat
     4981 tacagtcgtc tttgaggacc taaccagctt ttattgaagg gagactatga ctataaagga
     5041 tttggtaata tctatagctg acacacttac attaagttac acaagatttt tctggaattc
     5101 cttatatatt ttgtatatta cttgtctatt ggatacaggg ttagtgaaga aatttcccca
     5161 atctgtaggt tgctgttttg tcctattgac agtgtccttg ccctccagaa gcttttcagt
     5221 tttataaggc cccatttgtc tagttttgat cttagagcct tagtcattgg ttttgtttag
     5281 aaaattttct cctgtgccaa cgagtttgag gctatatcca atatctctgc ttttagactc
     5341 cgtgtatctg gctttatgtt gagctctcca aaacacgtta ccccattaaa aaatggggac
     5401 agagctaaac agaattctca gcagacggat cttgaatggc cgagaagcaa agagttgttc
     5461 aacatcct
//
