LOCUS       XM_039087585            5255 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102555329
            (LOC102555329), mRNA.
ACCESSION   XM_039087585
VERSION     XM_039087585.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5255
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5255
                     /gene="LOC102555329"
                     /note="uncharacterized LOC102555329; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, and 94% coverage of the annotated genomic feature by
                     RNAseq alignments, including 6 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:102555329"
                     /db_xref="RGD:7532467"
     CDS             1..840
                     /gene="LOC102555329"
                     /codon_start=1
                     /product="predicted GPI-anchored protein 58"
                     /protein_id="XP_038943513.1"
                     /db_xref="GeneID:102555329"
                     /db_xref="RGD:7532467"
                     /translation="MGRCLQFQEGLQTHPLQPRRDHRRSREQGWLGRRMVVESRTWAV
                     PIPPCPGRVASARALHLTAVPAWERASKAPGTKPRLPGKIGPLPHTGNPDQGNPESVA
                     RRPRPPRPAPRESRDSAHSAAQQQPRGATEDPDLPSAPLPEPGLALHSPPLPQPQQTP
                     LAGSPLTSPAAAAAAAAAAAAAAAAATTRSRDTSLRPVLTLPPERGGRGSRPGRSRYR
                     RADTRWLTPCFSSHRASARAPNPEKRKPRRRSQWTSRPACGVELRTEPRALPMATLIK
                     EII"
ORIGIN      
        1 atgggacgct gcctgcaatt tcaggagggc ttgcagacac accctctgca gccccgcagg
       61 gaccacagga gaagccgcga gcagggctgg ctggggagga ggatggtagt tgaatcccgg
      121 acttgggccg tccccatccc accatgtccc ggtcgagtgg cttcggccag ggcgctgcac
      181 ctcactgcag ttccagcgtg ggagcgcgca agcaaagcgc ctggtaccaa gccaaggctg
      241 cccgggaaga tcgggccgct gccgcacaca gggaaccccg accagggaaa cccggagtcg
      301 gtggcccgga gaccgcggcc gccccgcccc gccccgcgcg agtcccggga cagcgcgcac
      361 tcggcggcgc agcagcagcc tcgaggggcc accgaggacc cggaccttcc gtccgcccct
      421 ctcccagagc ccggccttgc cctccacagc cctcccctgc ctcagcccca acagacgcct
      481 ctcgccggtt cgccgctcac ctccccggcc gccgccgccg ccgccgccgc cgccgccgcc
      541 gccgctgctg ctgcagctac caccagatct cgcgatactt cgctccgccc cgtgcttacc
      601 ctcccgcctg aacgcggcgg gcgcggatcc cgtcctggaa gatccaggta ccgtcgtgcg
      661 gacaccaggt ggcttacacc ctgcttctct tctcaccgtg catccgcccg cgctcctaac
      721 ccggaaaagc gaaagcccag aaggagatca cagtggacga gcagaccggc ctgtggagta
      781 gagctgagga ccgaacccag ggccttgccc atggcaactc ttataaagga aatcatttaa
      841 ttggaactgg cttacagttc agaggtttag tccagtacag tcacaatggg aagcatggca
      901 gagtgtgggc aggcacggtg ttatcaagac agctaagagt tctacatctg gattctcaag
      961 cagcagaaag agagaataag ccactgaacc tggcttgagc ctttgaaacc tcaaagccca
     1021 cctcaatgac acacttcctc caaggccaca cctcctaaga gtaccacacc ctgtgggcct
     1081 atgggggcca tttttattca gtcttgtttt gtatattcct gtgagctggc ccctctgtga
     1141 caacttctgc agaatcaaga gcctggaagg ttctagctca tccctgcaaa ctacactgag
     1201 gcctgctaag ctagcccatc ctgacaatct tgggtcagca aatgtgggcc cacatcaacc
     1261 tttctaactt atgctgcctg gaaacgactc ctcttacaga gactgagcat atggatgctg
     1321 aatgtgacaa cacagctcaa caaaataggg tgaagaaagg agatcccgtc caactggacg
     1381 ccactggttc aagcattgtc tgttagcttg atgaatacag aaagagtcta gaagatgagt
     1441 ggacttgcct aaggacacac aattgcctgt tactgaactg accctcagaa gaagtagcaa
     1501 caagggcatc tttgtttgac aaagtgacat gggaagtgac aactacatgt gtggtcttaa
     1561 agggccttgg tatactaaac agtaaatggt atcattaaag atgcaaggta tcaaaaatgt
     1621 cttttgatgc acacgggaca ttataaatac cagtaatagg gtttgcttaa ggccccccaa
     1681 aaaacacttt aagcagtaat tgaaaagtat tgtgtaaata gctgtgaacg agaccatcat
     1741 ttcgtgttct agaaggatgg aaggaggggt cgataagaac aaatgaaccc cctaaaaagg
     1801 ggttggggcg atagatggct caatggttag agctcttgcc tgtaccagtg tgaggaccag
     1861 aattcaaatc ctcaggatcc acataaagtc tgacacagta gccaacattt gtaatcccag
     1921 cgctcttata gccagatggg aggaagagac cagtaaatgg ctggaaactc aaggaccagc
     1981 tattctgtca tacctggttt tctctcccca cctcctcctc ttcctcttct tcctcctcct
     2041 cctcctcctc ctcttccccc cctctctctc ttttacacac acacacacac acacacacaa
     2101 ttttttaata gctggaaggg taggggaaaa acatgattga aatgagtttt taaggataca
     2161 tcagagatag taggtgtctt acttactgtt cttttgctgt gaagagacac catgaccagg
     2221 gcaaatctta taaaataaag aatttaatgg gggggggctt acagtttaga gggttggtcc
     2281 atgatcatca tggtgggggt atggcagaag ggtatggagc agtagctgag agttttatat
     2341 cctgacagca agtggaagac agagagcaac caggcatggg cctctgaagc ctcaaagcca
     2401 ctcttggtga cacaccttct tcaacaagga catatttcct aaggttccaa atagtctatc
     2461 aactggggac taaacttgca attatatatg tatatataat atataatata tatatatata
     2521 tatatatata tatatatatc catcccttgg aagccaatat tatttaaact cctgtagtag
     2581 acaaggtgga aagagaatag cattctagac agggacaaca aggatcagca agaaatactg
     2641 tggatggctg ggaagacggc acctgtgcct tgggaagtat cagaagccat atttgcaggc
     2701 aagtgtggtg acacacacct ggtcccagca ctgggagcct gaaacaggaa gattttgttt
     2761 tgttttttgt ttggtttttt gtcgttgttg tttttgtttt tagtgctaag ctagcttgag
     2821 ctacacagcc agatcagacc ctacttcaac cacagaaaga tctgcacttg ccatgagcat
     2881 gtagagacac cagaaaggag gagactggac tgaatcagga acgtcctcag aggtaggtcg
     2941 ggtcagccca atcttattgt tgtggagccc tagatctctg cctaagggtt tgatcaaagg
     3001 tggtttgatt atttctgtgc tctgataaaa atactctgac aaaatgcatc acagagagga
     3061 atgtttattt ggtttagagt ccattgttgt ggaggaagtt agggacaggc atcttaacat
     3121 cacaccgtct ccacagtcag taccagagag aagcaagcac acccatgctg cctccctgct
     3181 cactgtcagc tagatttctc cactccatct ctcagggtct gtcccaggaa atggtactta
     3241 ctgccttcct tcagggtggg tcttcccacc tcaatttaca gacaagacac ccacaacaca
     3301 ccagaccaac ccacaggcca tccctcagta agacttttct tagatgattt taggctgaca
     3361 gttaaaaagc aattggcaaa gacaggtcac ctgtaataga cagacattgc atctgtgggc
     3421 aaggaaatgt cccaggacca attctggcat ctcatagtca acctttagat gcaaagtgtc
     3481 cacctccttg ctaccaggac aaaggacatg atgtctcctg tcagctacta gtcccacaaa
     3541 ggctgtaccc ctatatgaaa ctcatctgtt gacgttggtg ccagcagagc agcagccctg
     3601 attggatgct gacgacagca gtggtagcag ccacggtgag cccctgacac ccaggacttg
     3661 gacatggtag agggctgcta gcccatcttt cagtggtggt tggtgagttc actgagtcag
     3721 acctacagtg tgctctgggg cactattctt agaagcttac tggaaaggtc ccctcctcca
     3781 gtgcctctgt gggcccctaa catctttcac cctttcacct ttcagcttaa agcagctagg
     3841 atttctactc aagaactctg acagagacca aagcaagctg gagcctggaa gacttggagg
     3901 actggcttgt tgactgcagg gcaaaggcaa ctttctccac tgtactgagc ctctcttaga
     3961 agtcagcagc ctctgtgctc actagtgctt tgcctatgtg ggatgggagg catcaaggca
     4021 gagaacagaa aagccacaat accttggctt cttggtgaca tcagcacact gctgggaggg
     4081 ctctagcccc acagagccct ggacagtccc atcactgaac taataaccaa ctcatgtggt
     4141 ttctatcccc agcaacccaa gcattcacac tgtacgagac aaaggcaatg atttctgggg
     4201 tgtagacaca cacataccca gccatgccta agctgctctg actgccgtgc atgctctgta
     4261 tgcatctgtt ctctccatca gccttatcca catcaaccct gttgggatac acacatttca
     4321 ttctgtaaag tataccctct ccctgttcct ccctgccctt tgatgggcaa agtgatctcc
     4381 tgcctcaatt cacacaacta ctaagttggg aagctgaagg atgcccagat tccaggcttt
     4441 tatccactgt gtttaatggc attgctaccc aacctcatta cattgcaaag tagaatctgt
     4501 agctttgaac cagctccctc gctttgctgc agaggacaaa tccagcttgg tctcttactc
     4561 tctgttcatg atcatacttt ctgttgtgtt ttgtttattt gaaacagggt ctcatgtagc
     4621 caaggccaac ctcagagagc tcctgatctt tttgcctcta cctcccaagt actaagattg
     4681 taggtatatt acaggtgctc accacaccag tcttcaggcc cactctgaaa tgaagttgac
     4741 aggaccacct tcttggaagc tgactatcgt cggtgctgct taacaaaggt gtttggctcc
     4801 ccactatgtc agtgcacaca tgatggaact tctggttctc tcggtcaggt cacggtctgc
     4861 tcaaagattg tgaatagagg gagaacgcaa cagtttctgg tacaaaatat taaaagctag
     4921 aatgagacag ggttctatct gtccagcaga gcagtgctct ggacagcggt ggctctgcca
     4981 agcagagtcc ctagcccaca caatatgagt taagcatgag cgctctggtt ctaagccatc
     5041 tagaactggg ccttgatgga tatcctagtg tgcattggtc tgtctcactg actgttttct
     5101 cctccacagg tattagtctt gtatttatga attcatttca actgaggaaa tgatgtttta
     5161 aatggcatct ctactgaggg gagaacctaa gtgagcagca tggcaactct ttatatcacg
     5221 tttactctgt agtgtattaa agcaatccaa aaatg
//
