LOCUS       XM_039082785            3769 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 120-like
            (LOC102555317), transcript variant X1, mRNA.
ACCESSION   XM_039082785
VERSION     XM_039082785.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082785.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3769
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3769
                     /gene="LOC102555317"
                     /note="zinc finger protein 120-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 2 long SRA reads, and 96% coverage of the annotated
                     genomic feature by RNAseq alignments, including 126
                     samples with support for all annotated introns"
                     /db_xref="GeneID:102555317"
                     /db_xref="RGD:7496161"
     CDS             253..2487
                     /gene="LOC102555317"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038938713.1"
                     /db_xref="GeneID:102555317"
                     /db_xref="RGD:7496161"
                     /translation="MDAVTYDDVNVNFTQEEWALLDPLQKSLYKDVMLETYKNLTAIS
                     CNWKDHNIEEHFQSFRRHGRHEKSRTGVKPSEYSHCGKAFACHSYHQRHERIHTGEKP
                     SEDTQYSEDFVHHRRLQIHKRTHSREKPYKYDQCDKAYSQYSHLRGHKRTHTGEKPYE
                     CKPCDKAFTYHSQLQNCEIIHTGEKLYNCNGCDKVYSQHSHLQIHKSTHPGEKPYACK
                     QCGKAFTYHSELQRHERIHTGEKPYKCNQCGKAFVQQCNLRIHKIIHTGEKPYKCNKC
                     DKVYSRHSTLQIHKSTHTGEKPYECDQCGKAFAYPSYLQRHKRTHTGEKPYECDQCGK
                     AFAQHSHLQMHIIIHTGEKPYKCNQCGKALASHSYLQVHKRTHTGEKPYGCDQCGKSF
                     GYHGHLQIHKRTHTGEKPYECNQCGKAFASHSNLQVHKRIHTGEKAYECNQCGKAFAY
                     SGRLQIHKRIHTGEKPYECNQCNKAFAQNSDLQTHIITHTGEKPYKCKQCGKAFASHS
                     YLQVHERTHTGEKPYECNQCGKAFAYHGRLQIHQRTHTGEKPYECNHCGKAFAQHSNL
                     QVHKRTHTGEKPYECNQCGKAFAYHSYLQVHKRMHTGEKPYECDQCGKAFGYHGHLQI
                     HQRTHTGEKPYGCSQCGKAFAGQNDLKRHERIHTGEKPYKCNECGKAFACNTSLRIHK
                     ATHTGVKPYECKQCCKSFASHGQLQKHERIHTGEKPYKCGQCGKAFSQSSHLQLHKRT
                     HTKE"
ORIGIN      
        1 gacctggact ggaagcctgt gtcccttaag cacagtctac cccaagggag gtgctcatgt
       61 cactcaagac tccgtggcca atcagaacct tcaggcggac ctgccaatca gaagagaagg
      121 cgggttcttc cgggtgccag gcggcgggtt ccgcctagca gctgagcagg cttgagtgtt
      181 ttggggtgct gtgctttctg tcctgccgct ggatgctatg aagtgcgctc aggcaagctc
      241 cgaagttgcg acatggatgc ggtgacttat gatgatgtga atgtgaactt cactcaagaa
      301 gaatgggctt tgctggatcc tttacagaag agtctctaca aagatgtgat gctggagacc
      361 tataagaacc tcactgctat aagctgcaac tggaaagacc ataatattga agaacatttt
      421 caaagtttca gaagacatgg aaggcatgaa aaaagtcgta ctggagtgaa accctctgaa
      481 tattctcact gtggtaaagc ctttgcatgt cacagttatc atcaaaggca tgaaagaatt
      541 catactggag agaaaccctc tgaagatact cagtatagtg aagactttgt acatcacaga
      601 cgtctccaaa tacataaaag aacacattct agagagaaac cctacaaata tgaccaatgt
      661 gataaagcct attcacaata tagtcatctc cgaggacata aaagaacaca cactggagag
      721 aaaccttatg aatgtaagcc gtgtgataaa gcctttacat accattctca acttcaaaat
      781 tgtgaaataa ttcatactgg agagaaactc tacaactgta atggatgtga taaagtctat
      841 tcacaacaca gtcatcttca aatacataaa agcacacatc ctggagagaa accctatgca
      901 tgtaagcagt gtggtaaagc ctttacatac cattctgaac ttcaacgtca tgaaagaatt
      961 catactggag agaaacccta caaatgtaat caatgtggta aagcctttgt acaacagtgt
     1021 aatcttcgaa tacacaaaat aatacatact ggagagaaac cctacaaatg caataagtgt
     1081 gataaagtct attcacgaca cagtactctc caaatacata aaagcacaca tactggagag
     1141 aaaccctatg aatgtgatca atgtggtaaa gcctttgcat atcctagtta tcttcaaagg
     1201 cataaaagaa cacatactgg agagaaaccc tatgaatgtg atcaatgtgg taaagccttt
     1261 gcacaacaca gtcatctcca aatgcatata ataatacata ctggagagaa accttacaaa
     1321 tgtaatcagt gtggtaaagc cctagcatct catagttatc tccaagtaca taaaagaaca
     1381 catactggag agaaacccta tggatgtgat cagtgtggta aatcctttgg atatcatggt
     1441 catcttcaaa tacataaaag aacacacact ggagaaaaac cctatgaatg taatcagtgt
     1501 ggtaaagctt ttgcatctca tagtaatctc caagtacata aaagaataca tactggagag
     1561 aaagcctatg aatgtaatca gtgtggtaaa gcctttgcat attctggtcg tcttcaaata
     1621 cataaaagaa tacataccgg agagaagccc tatgaatgta atcaatgtaa taaagccttt
     1681 gcacaaaaca gtgatctcca aacacatata ataacacata ctggagagaa accttacaaa
     1741 tgtaaacagt gtggtaaagc ctttgcatca catagttatc ttcaagtaca cgaaagaaca
     1801 catactggag aaaaacccta tgaatgtaat cagtgtggta aagcctttgc atatcatggt
     1861 cgtcttcaaa tacatcaaag aacacatact ggagagaaac cctatgaatg taatcattgt
     1921 ggtaaagcat ttgcacaaca cagtaatctc caagtgcata aaagaacgca tactggagag
     1981 aaaccctatg aatgtaatca gtgtggtaaa gcctttgcat atcacagtta tctccaagta
     2041 cataaaagaa tgcatactgg agagaaaccc tatgaatgtg atcaatgtgg taaagccttt
     2101 ggatatcatg gtcatcttca aatacatcaa agaacacata caggagagaa gccctatgga
     2161 tgtagtcagt gtggtaaagc atttgcaggt cagaacgatc ttaaaagaca tgaaagaatt
     2221 catactggag agaaacccta caaatgtaat gaatgtggta aagcctttgc gtgtaacact
     2281 agtctccgaa tacacaaagc aacccatact ggagtgaaac cttacgaatg taagcaatgt
     2341 tgtaaatcct ttgcctctca tggtcaactt caaaaacatg aaagaattca tactggagag
     2401 aaaccttaca aatgtggtca atgtggtaaa gccttttcac aatcaagcca cctccaacta
     2461 cacaaaagaa cacacactaa agagtaaccc tgtgaatgta accaatgtgg taataaagcc
     2521 tttactgtga tcatcaaagg tgtggtggtt taaatatact tggcccatgg caagtatggc
     2581 cttcctggaa tagatgtggc ctttgaggaa gtatgtcact gggggggggg gggggggcgc
     2641 tttgagatcc catgcttaag ctctacccag ggcagaagag tcttctggct ccttctgatc
     2701 aagatggaga actctctcct ccagtaacat gtctgtttgg acactgccat tcttcccacc
     2761 ttgataatag actgaacctc tgaatctgta taccaccccc aattaaatgt cctttctaag
     2821 agttgcctta gtcatggtgt cttttcacag catgaaaacc caaattaaga caaacagcat
     2881 aaaagatacc acactagaga gaaactatga atgtattgaa tatggtgaag cctttgcaca
     2941 tttctatagt tctcactaga acaaaagtat tcgtacttcc attcactgaa accctgtgaa
     3001 tggaagcaat gtacagcctt tgcccttcac aattatctat gaatacagga aataacacac
     3061 actagagaaa agccttatga atgggctcag tgtggtaaag tctttgtgtt ttgaaatctg
     3121 cataaatact taacatttca aaaacatggt caaagtaaat gccaggagtt tattggaaac
     3181 aagctgagtt agaaggttag ggattatgat tagggtggtt gggtgtgcag ttagtattag
     3241 aaagttaggg gttagggtta gagattatgt tagggttagg gggtttaggg ctagggggat
     3301 tatgttagca aggtggggtt agagttaagt tgtggggata gggttacggg gttagaaaaa
     3361 aagaaaaagg tgtaaatttg agggaggaaa tggggggagg ttgattgtgg gaaagggagg
     3421 gatgaaaatg atatataata ttcacaaaat tctcaaaata aaaattatca agttaaaaat
     3481 catttatccc aataaattga aaaactctaa aataaagtaa atagacttct gaatgtatat
     3541 gacttaccaa aagtaaatca tgaagatata aaaaaattga acagctttgt agaaagcagt
     3601 aagagtgaag tagtgatcaa atatctacca aataaaaaaa attaccagac cttcaatgaa
     3661 atactaacac aaatgcttct caaactattc tattaaatag caaaggaagg gcacattacc
     3721 aaactatgaa gctaggatta gccggatact aaaaccagaa acaaacaaa
//
