LOCUS       XM_039084322            2089 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC102555289), transcript variant X1, mRNA.
ACCESSION   XM_039084322
VERSION     XM_039084322.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084322.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2089
                     /gene="LOC102555289"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 24 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102555289"
                     /db_xref="RGD:7694240"
     CDS             58..1773
                     /gene="LOC102555289"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038940250.1"
                     /db_xref="GeneID:102555289"
                     /db_xref="RGD:7694240"
                     /translation="MVSRADVPIPGGAAEDCGVRRGDAVTYEDVHVNFSQEEWALLDP
                     SQKSLYKDVMLETYWNLTAIGYKWEDHNIEEYCQSSRGHGRCISCPSGYGKKQCTGLF
                     PRPIRRYVVIPFVKRGGEWDTSLQVLGFPASVGIYQNTDIGEKPYEYKESGKSSFCPD
                     LLCTCGVTHTTGKCYECNQCGKALSSSSSLQRHDQTHVGNGSDKRETSSKSLTHHRHL
                     QIQKTACDDKDLCEWNQCGKPSLQLHQRTHLEMKCCEYNQEDKLITHQNCNQEGRSNT
                     RDPKRDYHQWGKAFACPSYLQIHERIHIGENPYECIHCGRTFTCHSTLQMHERIHTGE
                     KPYKCNQCGKTFACKRYLQIHERIHTGEKPYKCNQCGKAFACNSYLLIHERIHTGEKP
                     FKCNQCGKAFACNSYLQMHERIHTGEKPYKCNQCGKAFACNSNLQKHERTHTGEKPYK
                     CNQCGKAFTCHSTLQIHERIHTGEKPYKCNQCAKAFARKRYLQIHERIHTGEKPYECN
                     QCGKAFAYSSSLNKHERTHTGEKPFECNQRGNPKQAFACLSSLQKHEGIHTEKSSRVG
                     DLAQW"
ORIGIN      
        1 atctgtgacc cgctttcggg agctgtgagg agagcggggc gattcgggat ccacgccatg
       61 gtgagcaggg ccgacgtccc cattccggga ggagccgcgg aagactgtgg ggttcgtcgc
      121 ggggatgcag tgacctatga ggatgtgcat gtgaacttct ctcaagaaga gtgggcattg
      181 ctggatcctt ctcagaagag tctctacaag gatgtgatgc tggagaccta ctggaacctc
      241 actgctatag gctacaaatg ggaagaccac aatattgaag aatattgtca aagttctaga
      301 ggacatggaa gatgtatcag ctgtccctct ggatatggaa agaagcagtg tactggtctc
      361 tttcctagac caattagaag atatgtagtc atcccttttg tgaaaagagg aggtgaatgg
      421 gatacaagtt tacaagtact tggttttcca gcttcagtgg gaatatatca aaatactgac
      481 attggagaaa agccctatga gtacaaggaa agtggaaaat cttctttctg tcctgattta
      541 ctttgcacat gtggtgtgac tcacactaca ggaaaatgtt atgaatgcaa tcagtgtggt
      601 aaagctctga gttcttccag ttctcttcag agacatgacc aaactcatgt gggaaacgga
      661 agtgataaac gtgaaacaag cagtaaaagc ttaacccatc acaggcatct tcaaatccag
      721 aagacagcct gtgatgacaa ggacctctgt gagtggaatc aatgtggtaa accctcttta
      781 caattacacc aaagaactca tttggaaatg aaatgctgtg aatataatca agaagataaa
      841 ctcattacac atcagaattg taatcaagaa ggtagaagta atactagaga cccaaagcgt
      901 gactatcatc aatggggtaa agcctttgca tgtcccagtt atcttcaaat ccatgaaaga
      961 attcatattg gagagaatcc atatgaatgt attcactgtg gtagaacctt tacatgtcac
     1021 agtactcttc aaatgcatga aagaattcat actggagaga aaccctataa atgtaaccaa
     1081 tgtggtaaaa cctttgcatg taagaggtat cttcaaatcc atgagagaat tcatactggc
     1141 gagaaaccct ataaatgtaa tcaatgtggt aaagcctttg cttgtaacag ttatcttcta
     1201 attcatgaaa gaattcatac tggtgagaaa ccctttaaat gtaatcagtg tggtaaagcc
     1261 tttgcatgta acagttatct tcaaatgcat gaaagaattc atactggcga gaagccctat
     1321 aaatgtaatc agtgtggtaa agcctttgca tgtaacagta atcttcaaaa gcatgagaga
     1381 acacataccg gagagaaacc ctataaatgt aatcagtgtg gtaaagcctt tacatgtcac
     1441 agtactcttc aaatccatga gagaattcat actggagaga aaccctataa atgtaaccaa
     1501 tgtgctaaag cctttgcacg taaaagatat cttcaaatcc atgagagaat tcatactgga
     1561 gagaaaccct atgaatgtaa tcaatgtggt aaagcctttg catatagcag tagtcttaac
     1621 aagcatgaaa gaactcatac tggagagaaa ccttttgaat gtaatcaacg tggtaatcct
     1681 aaacaagcct ttgcatgtct cagtagcctt caaaagcatg aaggaattca tactgaaaaa
     1741 agttcccggg ttggggattt agctcagtgg tagagcactt gcacaagcgc aaggccctgg
     1801 attcggtcct cggctccaaa aaaaaggaaa aaaaaaaaaa aaaaaaaaga aaaaaattcc
     1861 ccagaaatat ctaagaaata tctaagaaat gtatctaaga aataaggtgt agccttgcat
     1921 actgtattca ttttcccatc tgagttttct tagtggtgtt tgattaagat tagtagaacc
     1981 atttcttcat taaaatactg tctccttttc aaattttaga catattgtca ctccaaaatt
     2041 taggaatacc agacaatttg aataataaaa tctatttgtg aatgaaata
//
