LOCUS       XM_006228360             744 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus oocyte specific homeobox 1 like 1
            (Obox1l1), mRNA.
ACCESSION   XM_006228360
VERSION     XM_006228360.2
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006228360.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..744
                     /gene="Obox1l1"
                     /note="oocyte specific homeobox 1 like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:102554917"
                     /db_xref="RGD:7510102"
     CDS             1..744
                     /gene="Obox1l1"
                     /codon_start=1
                     /product="oocyte-specific homeobox protein 6-like"
                     /protein_id="XP_006228422.2"
                     /db_xref="GeneID:102554917"
                     /db_xref="RGD:7510102"
                     /translation="MSWTPSFSVNSGLQSTLRPMMGSGEHGDQRTSKVTSRTERKVRI
                     TYTEKQKRMLQDHFNNCRYPTQKDRMALASRVGVTHNDIQVWFKNNRAKDKRKNRQNI
                     PAALPETNGSSEAVSESTHFPDSLPVVDSANVESTFVLDSIPKVNQSQEFSLHPVQAC
                     GGAMCSQQEDLLYGHAPDTAEDSGQSAAGEVQTGLAVAEAPLAMVCATQCPQSTQDSG
                     PSAEELWQRILEDFDKSEDWYSWGCTPSP"
ORIGIN      
        1 atgtcttgga caccaagttt ctcagtgaat tctggtttgc aaagtacact aagacccatg
       61 atggggtcag gtgaacatgg tgaccaacga accagtaaag ttacttcaag gacggagcgg
      121 aaagtccgaa ttacgtacac tgagaaacaa aagcgcatgc tgcaagacca ttttaataat
      181 tgcagatatc caacccagaa ggatcgcatg gcactggcct cacgggttgg tgtgacacac
      241 aatgacatcc aggtctggtt caagaacaac cgggctaagg acaagcgcaa gaatcgccag
      301 aatattccag cagcactgcc agagacaaat ggaagctctg aagctgtttc tgagtcaacc
      361 cattttcctg attccttacc agttgttgac tctgccaatg ttgagtccac atttgttctg
      421 gattccattc caaaagtcaa ccagagccag gaattttctc tgcatcctgt tcaggcctgt
      481 ggtggtgcca tgtgtagtca gcaagaagac ctgctttatg gccatgcccc tgatacagct
      541 gaggactctg gtcaatcagc agcaggtgag gtccagactg gcctagcagt agcggaagct
      601 ccattagcca tggtatgtgc cacccaatgt ccacagagta ctcaagattc aggtccatct
      661 gctgaggagc tctggcaaag gatacttgaa gactttgaca agtcagagga ttggtactct
      721 tggggatgca ctccttcccc atga
//
