LOCUS       XM_039093912            6126 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC102554746
            (LOC102554746), mRNA.
ACCESSION   XM_039093912
VERSION     XM_039093912.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093912.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6126
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6126
                     /gene="LOC102554746"
                     /note="uncharacterized LOC102554746; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 99% coverage of the annotated genomic feature
                     by RNAseq alignments"
                     /db_xref="GeneID:102554746"
                     /db_xref="RGD:7683338"
     CDS             787..1758
                     /gene="LOC102554746"
                     /codon_start=1
                     /product="uncharacterized protein C13orf42 homolog"
                     /protein_id="XP_038949840.1"
                     /db_xref="GeneID:102554746"
                     /db_xref="RGD:7683338"
                     /translation="MFRKIHSILHHGPQRKAAAEGPYYTGASPAVRLIRSTSMYVVAD
                     HLERPSESLKKYRSTHSMDTSLYYLQQEDRAWMYSRTQDCLQYLQELLALRKKYLSSL
                     GDLRPQRTPGAGSTSSKSSKGAVQKTPEASKNKHLKKATSKKYSQFSTDVAEAIAFFD
                     SIIAELETEKRPRAAEADQPNEDVDFDVATSSQEHSLHSNWILRAPRRHSEAMAAHAT
                     ADSRFRRSTEHRVAGTQRRLERHPIYLPKAVEGAFNTLKFKPKAHKKDLGSSRQILRN
                     FSKEDMEWEEEFFTQESPVSLEEEHYQTENPKGEWLVRERLWERTVP"
ORIGIN      
        1 ttgtgctatt ctgggaagtt agtcttcccc cagtgtatat gatcgctcat ccactcactg
       61 actcatttgt gctgaaagtt gcgatccaga cacctgaatc cttcagccct caaagggctg
      121 ctatcaggtg accaccctga ggtcctctta cgcagggcca gcctcctcca ggacgctcgg
      181 atgcctgctc agagcccggt ttatcagggc atctgccagc tcctgccaag ggccctggtt
      241 gtgtccaccc tggcctatga ggggagctgg atcttaccca gagcaatacc tgggctttgg
      301 tggagggtat tacagcagag taagagttta tgtcggagct acagaattca gcaccagggc
      361 cagctcaact caggcagaat tgttaaaaca tcgtgaagac aagccaaagt gggtgatcac
      421 ccttgggaac ggaaaacgca aaggaaatat gattgagcag gtaaagcatc gtctcccttc
      481 ctctccagct gaacctttcc atggaaaagc ataggacata tttgcaactg tttagaaagg
      541 cctgcctggg cctgtctcct ggagtgagcc tctgcatgtc atcttagctg tcccatctaa
      601 gtgtccctcc atgagagagg tgcaggtcac ttgcctgaca cagctcttcc tcaccgggat
      661 tgtgagagct gagcctcttg ggaggccgat ggcgcagagc ctgcatatgg gttcctctgc
      721 ctgctgctgg atcaagtaac gccggtgctg gcggccgacg gttcccacgg ttggaaaccg
      781 agcaccatgt tcagaaagat ccactctatc ctccaccacg gcccacagag gaaggcagcg
      841 gccgaaggcc cctactacac tggagccagc cctgctgtca ggctgattcg cagtacctcc
      901 atgtacgtgg tcgcggacca cttggagagg cccagcgagt ccttaaagaa gtacagaagc
      961 acgcacagca tggacaccag cctgtactac ctgcagcagg aggaccgagc ctggatgtac
     1021 tcgcgcaccc aggactgcct gcagtacctt caggagctgc tggccctgcg caagaaatat
     1081 ctcagcagcc tgggtgacct gagaccccag cgcacgccgg gcgctggctc cacctcttcc
     1141 aagtcctcca agggagcagt acaaaagacc ccagaagcca gcaaaaacaa acacttaaag
     1201 aaagccacct caaagaaata ctcccagttc agcaccgatg tggctgaggc cattgccttc
     1261 tttgactcca tcattgcaga actagagaca gaaaaacggc cgagagctgc cgaggccgac
     1321 cagcctaatg aagatgtgga cttcgatgtg gctaccagtt cacaggagca cagcttgcat
     1381 tccaactgga ttctgcgcgc accacgcaga cattccgagg ccatggctgc ccatgccact
     1441 gcggatagcc ggtttcggag aagcacagag cacagggtcg ctggcaccca gaggaggctt
     1501 gagagacacc ccatttacct gcccaaggct gtggaagggg cgttcaacac cttgaaattt
     1561 aagcccaaag cccacaaaaa agacttgggg agctccagac agatccttcg caacttctcc
     1621 aaagaagaca tggagtggga ggaagagttc ttcacccaag agtccccggt gtctctggag
     1681 gaggaacact accagacaga gaatcccaaa ggggagtggc tggttcgaga aagactctgg
     1741 gagcggacag tgccctgatt ggtttgtctc agcctgggtc ttgctttcag ggcagtgtga
     1801 catgtttggt agagttaaga atgaaattac aaagctgtaa cacaaccaaa ctcgtcaaca
     1861 ggatacccgt gggagctcaa ctagtgccaa atagctgcat ttaccagggg atgccccggg
     1921 gggtcagagc ctgggcttcc cacaggagtg gccacgagaa agcagagccc ggctcctggt
     1981 gttcccaaac agaggcacag gggacttgaa tgagtgcccc tgccacctgg cctggcctgt
     2041 cacacatagg agattgtgca gatggctgca cgtcatgtgt tcagaactgg aaggagccaa
     2101 tctggagttc tggcccaaag tttccaagcc tgtgtcccag aagcctattg gtgaagtact
     2161 gaggtcccac ctttcatgaa aacacagtca agaaaacacc tactctgtgc taggtcttct
     2221 cagggtttcc agaatcttag gctgctagac tgaaatgagg ccactatcct ttcggtaggg
     2281 cagagaaagg ttgcatcagg gctttcctta tggtcacatt gttgacgcca gccgaattgt
     2341 cctgcccctc cataaagaca gctggctcaa ggtagtgtag gtaggtgggt gttttctaat
     2401 gttcccttct aattcttaca cacataaagc tgtatccatg ccatctgctc accagaggct
     2461 ctgtgtctcc caggtacagg tagctgaagc acgatgcgct ttctgtctag gaagaatttt
     2521 gtggttcagc cattggctaa ctcactgctc cacttccagt gtgggctttg tatacagtcc
     2581 agtatacagt cttcatttgg ccatagagtt acaccaatta aggttaagag ccactggtca
     2641 gagaagacac tccactttga ccttcctgct ttttctctca tctgatacta agcaagcatc
     2701 ttggtcacta ctccattgct gtgataagac accacggtca aaggcggctt acagaagaaa
     2761 gggtttattt ggacctcaca tttccatagg ctgagcccgc catggagggg agcaatggct
     2821 ggagcagaag ctgagagctc acaaactgag gagagagaga gagagagaga gagagagaga
     2881 gagagagaga gagagagaga gagaacaagt gcacaaacta actgggaata gtttctgctt
     2941 tggaaatctc aaagtcatcc cagtaataca cctcctccaa caaggccaca cctcccaatc
     3001 cttcccaaac agttccagca actggggccc aatattaaag tatttgattc tatggggcca
     3061 tactcaatca aaccaccata cctagcctat atgattctat ggggccatac tcaatcaaac
     3121 caccatacct agcctatacc cactcagctt ctgagagagc tgagattagg tgtgctggca
     3181 gggagggcaa ctgacctttc ccactgaatc ctggcatctt cttatacaac agtgactttt
     3241 cagggggcat ctccataagt gtgagcctgc cttggatagg ggagcggatg tagaaagaga
     3301 agcaccatct aaatcaagcc aaggacactc tagtctcagt gaccatgaca attgcataac
     3361 gtcctatgcg ctatttgttt ttttaaaaaa atcaaatagt aataataaaa aacctttatt
     3421 tatgctatct ttcgtgtctg aagctgagaa tttttaactc tgaagaaaag tgacagcacc
     3481 tgtgtagcag ccctaagaac gtcaagccaa cacgtttccc aggtgaacac acacccaccc
     3541 tttctgtgtc ctctgcattg ttttccaagt gccaatgtca atgtctggga ggtttctttc
     3601 ctttgttgct tgaccaaaaa agccacatcc ggagagcttt aatgctgtgg tccatctgca
     3661 cagacgtttt ccccctgaat gtggctttct ttaaggtctg tgtttgaaag ctctttgctg
     3721 tggacaaact cgggggatgg agagctttac taagcaaccg tttagagtag gccaccctac
     3781 tgtgtaagcc tggtgtttaa gacacgacaa gggcgcagga tggggaggag ctcagagccc
     3841 agcacacttt cttcttctct ggggtttctt ctctttagga catggagctc tataccagtc
     3901 tactttgctt ggggttttaa atgcttttgt ctttagtaag atggccttct tgcaaagttc
     3961 taagagttga actcatgtct tatggtgcaa cttttctttg aagttcgtgg taaatcccag
     4021 gatctgggct atgactcatg aatcttgtaa atacaagggt ttaagataag tcaaattgga
     4081 aacaataaaa ggcaatttgg gaaaatcaac atgccctggc tgattcttgt tcttcttgag
     4141 gtatctaagt atttaagggg atcagctggt caaaactgtc ttagtttggg tagatgaaac
     4201 atgtaaagaa taaagtctta ttcaataaag ttcttgtctt gtaagcagaa agacctaagt
     4261 ccaactccct acaacttttt aaagaaatat ttattttatt tatatgagta cacagtagct
     4321 gtcttgaaac acatcagaag agggcacttg ataccatttt agatggctgt aaaccaccat
     4381 gctgggattt gaactcagga cctctggaag agcagtcagt gctcttaacc actgagccat
     4441 ccctccagtc ccaacctttt tcttcaaaaa aaattctaaa agccaagttt ggtggcacac
     4501 acttgtaatc taagcactgg gaaggcagag actggtggat ctttaggact accagagttt
     4561 gtcagcgtat cctaattgac aagctctaaa cctgtgagag gccctggctc agacaaaata
     4621 caaggtagat ggcatccaac gaaagacacc tgaggctacc ctttagccct acacacacat
     4681 atgtgcacac ctgcacatat gtgcaacata cacatataaa cacccaaaac aggaacagaa
     4741 gggaaaagga aagaaatgaa ggaaagaaag agacaatttt aaaggagaac tccctggcct
     4801 ttagccactg gctttgtgcc ctctcatccc catgtaagct tcccatcact gggttgctat
     4861 gcaacaatgg agaacacggc cacctggtgt tggaccagag cagctctaac agaaggctgt
     4921 atttcctgca tcactggttg cctttcatag tgatttgtct cttgatgttg ttaataattt
     4981 atcacaaata agttataatt aaaaaataaa ttatcacaaa tataaaagca taaagcccca
     5041 caagttcatt accttaaact ttgggagtgg gaaacccaag tcagccgtgt tggttaaggg
     5101 ttggtagagc ttgtttcttc tgaagccctc cctagtctct ggggacaatc acactccttg
     5161 gctagtggct ctttccttgt atgaccccag cctcttgctt tctcagagct ccagctgatc
     5221 tctgcctccc ctttataagg acttgcaata ccagtccctc ccattgggat gattcaggaa
     5281 acttgatcca ttcaaaaatc cttcatttaa tcaaataacc agaaactctt ttgtggtgtg
     5341 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtaag gtgatgctcc taggttctgg
     5401 gttaggagaa catctctgga aggttcattt ttcaaccata catacctagt accacagatg
     5461 ttactgaagg cttgtcacag gaaagtttgt gttagtcaca ggaggctgac tggggcaaga
     5521 gttttcagac tccacaggtt tcctctcatt ctgcagggtg cagtcactct agccagtgcc
     5581 actctgtccc accagcaggt gtcctcttgg ttgtactcac cgtgacctca aaagagagag
     5641 ctcatggtct gagcatgcct cagtgcctgg aaccacacta atcacaaatt gttgatggtt
     5701 tgattgacag tttgtccaaa cgaacaaaga gaagagctca cgctaaggtc tgtagacagc
     5761 aagagacatc accttgtaaa gtgtttgggg aagagagagg gattcaggct aaggctgtat
     5821 cacacatgct ctgtgctgga ggatgtgtgg caggtttgag gctgcccaga gcttaaattc
     5881 attcatgaga tacgaatgct gagcagagta accagagttg ccagaattgg accgtgctga
     5941 actctggagc agaatagaaa gatggatgtg taaaagatga acaagcagta agcggttagc
     6001 attcggggtg tgctgaggac ccagaaggcc cgatatatgc caaatgtgaa tctagcataa
     6061 ccatagtact ttatcatcat caccatcatc atcctcctcc tcctcctcct caccaccacc
     6121 accacc
//
