LOCUS       XM_039106597            1860 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 709-like
            (LOC102554666), mRNA.
ACCESSION   XM_039106597
VERSION     XM_039106597.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106597.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1860
                     /gene="LOC102554666"
                     /note="zinc finger protein 709-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins, and 93% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:102554666"
                     /db_xref="RGD:7644011"
     CDS             1..1719
                     /gene="LOC102554666"
                     /codon_start=1
                     /product="zinc finger protein 431-like"
                     /protein_id="XP_038962525.1"
                     /db_xref="GeneID:102554666"
                     /db_xref="RGD:7644011"
                     /translation="MPKDVLTYDDVHVNFTEEEWALLNPSQKSLYQCVMLETCRNLSA
                     IGYIWEDHTTEEYCKHSGRHGRYERSFTGKQTFDFIQNGNGFAVQSHTQRHNGEKTYE
                     GNLCGKAFVQRNNLKTHKRTHNGEEPSQCNQCCKDIVRSSALQNHKGTHTGEKRCECN
                     QCGKAFAQRSCLKRHKRSCNAEKRYNCNQCCKAFVQNHNLQKYKRTHTLQKPYECNQC
                     GKAFAHSSTLQNYKRTHTGEKPYECHQCGKAFAQSSTLQSHIRTHTGEKPYECNQCGK
                     AFADSSTLQRHIRTHTGEKPYECKQCGKAFAHSSTLQKHKRTHTGEKPYECKQCGKAF
                     TDSSTLQKHKRTHTGERPYECNQCCKAFTRNSHLQHHIRTHTGEKPYECHQCGKAFAY
                     SSHLQSHIRTHTGEKPYECKQCSKAFADSRTLQQHKRTHTEEKPYECNQCCKAFTRNS
                     HLQRHMRTHTGEKPYECNQCGKAYADSSTLQKHKRTHTGEKPYECKQCGKAFADSSTL
                     QRHIRTHTEEKPFECNKCGKAIARSSTLQRHIRTHTEEKPYECNQCGKAFAKRSSLKS
                     YKRTYN"
ORIGIN      
        1 atgcccaagg atgtcctgac ctatgatgat gtgcatgtga acttcactga ggaagagtgg
       61 gcattgctga atccttctca gaagagtctc taccaatgtg taatgctgga gacctgtagg
      121 aatctcagtg ctataggcta catttgggaa gaccatacta ctgaagaata ttgtaaacat
      181 tctggaagac atggaaggta tgaaagaagt tttactggaa agcaaacctt tgattttatt
      241 cagaatggta atggctttgc agttcagagt catacccaaa ggcataatgg ggagaagacc
      301 tatgaaggta acctatgtgg caaagctttt gtacagagga ataatctcaa aacacataaa
      361 aggacacata atggagaaga accttctcaa tgtaaccaat gttgtaaaga cattgtaaga
      421 agcagtgctc tccaaaatca taaaggaaca cacacaggag agaaacgctg tgaatgtaat
      481 caatgtggga aagcctttgc acaaaggagt tgtctcaaaa gacataaaag atcatgtaat
      541 gcagaaaaac gttataactg taaccaatgt tgtaaagcct ttgtacaaaa ccataatctc
      601 caaaaatata aaaggaccca tacattacag aaaccctatg aatgtaacca atgtggcaaa
      661 gcctttgcac acagcagtac tcttcaaaat tataaaagaa cacacacagg cgagaagccc
      721 tatgaatgtc accaatgtgg caaagccttt gcacagagca gtactctcca aagccatata
      781 agaactcata caggagagaa accctatgaa tgtaaccaat gtggcaaagc ttttgcagac
      841 agcagtactc tccaaagaca tataagaact catacaggag agaaacccta tgaatgtaag
      901 caatgtggca aagcctttgc acacagcagt actctccaaa aacataaaag aacacacaca
      961 ggagagaaac cctatgaatg taagcaatgt ggcaaagcct ttacagacag cagtactctc
     1021 caaaaacata aaagaacaca cacaggagag agaccctatg aatgcaatca atgttgtaaa
     1081 gcctttacac gaaacagtca tctccaacat catataagaa cacatacagg tgagaagcct
     1141 tatgaatgtc accaatgtgg caaagccttt gcatatagca gtcatctcca aagccatata
     1201 agaactcata caggagagaa accctatgaa tgtaagcaat gtagcaaagc ctttgcagac
     1261 agccgtactc tacaacaaca taaaagaaca cacacagaag agaaacccta tgaatgtaat
     1321 caatgttgta aagcctttac acgaaacagt catctccaac gtcatatgag aacacataca
     1381 ggcgagaaac cctatgaatg taaccaatgt ggcaaagcct atgcagacag cagtactctc
     1441 caaaaacata aaagaacaca cacaggagag aaaccctatg aatgtaagca atgtggcaaa
     1501 gcctttgcag acagcagtac tctccaaaga catataagaa cacacacaga agagaagccc
     1561 tttgagtgta acaaatgtgg caaagccatt gcacgcagca gtactctcca aagacatata
     1621 agaacacaca cagaagagaa accctatgag tgtaaccaat gtggcaaagc ctttgcaaaa
     1681 aggagtagtc tcaaaagtta taaaagaaca tataattgaa aaaaccttat gaattaacca
     1741 atgttgtaaa ccctttgtaa aaagtggtga tcaccaaata tataaaagaa tgcatacagg
     1801 agaaaaccct atgaatgtaa tcaatgtgtg aaatcatttg caggaagtag taatctctaa
//
